Gene Synpcc7942_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0393 
Symbol 
ID3774914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp386677 
End bp387357 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content59% 
IMG OID637798799 
Producthypothetical protein 
Protein accessionYP_399412 
Protein GI81299204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACAG CGCCGGGAAT CATTGGACGG GTTTTGGCTC CGGCCATTAA GCTCTGGCTG 
CACAGCCAAG CCACGATCGC GCAGCTAGAT CTGACCATTG GCGGCAGCAG TCGTCAATTG
CTGGGCGGCA CAATTCCCGA GGTCGCGATC GCGGCACAAG GCATTGTCTA CCAAGGGCTT
TGTCTGGAGC GCATGTCGCT GTTGGGCTCC GAAATTCGCG TCAATCTGCC TCAGATGGTG
CGCGGCCAAG CCTTCCAACT TCTGCAGGAA ATTCGCATTG CCGCTGAGGT GCAACTGCTG
GAAGCTAACT TCAACGACTC ACTCAGCTCC GAGCTTTGGC AACAGGCGAT CTGGCAGATC
TTGGCGGACT ACTGGCAACA GCTAGGACTC TCGGTAGAGC AGCTGGCGAC CCAACTACAG
TTTCGCCTCC GGTCCGATCG CCTCCACCTG CTGATCACGC CCGACACAGA GTTATCCCTC
GGCCTCGCTT TAGTAGATCC GCAGACTTTA CGCCTGCACA GTCCCCAGTG GCAGTCAGCG
ACCCAGCCCG CGCCTGATTT GAGTGGGCTT GAGGCCTATG CGATCGCCCT CGGTGAGGAT
GTCTCGATCG CCAGTTTGGT GATTAGCGAC GGCAAGGTCG ATCTGACGGG AGAGTTCCGA
GTTCTCGCGA CAGCGGCCTA A
 
Protein sequence
MGTAPGIIGR VLAPAIKLWL HSQATIAQLD LTIGGSSRQL LGGTIPEVAI AAQGIVYQGL 
CLERMSLLGS EIRVNLPQMV RGQAFQLLQE IRIAAEVQLL EANFNDSLSS ELWQQAIWQI
LADYWQQLGL SVEQLATQLQ FRLRSDRLHL LITPDTELSL GLALVDPQTL RLHSPQWQSA
TQPAPDLSGL EAYAIALGED VSIASLVISD GKVDLTGEFR VLATAA