| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0391 |
|---|
| Symbol | |
|---|
| ID | 3774912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 383545 |
|---|
| End bp | 385125 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637798797 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_399410 |
|---|
| Protein GI | 81299202 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4188] Predicted dienelactone hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0764093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGC CCCAGTCTTG GTTCCCAACG CTACTGAGTA CCGTGCTCGG TTTTGGGGCT
GCGGTGCTCA CAGCCGCCCC TAGTTCAGCG GCCGAAAGGA TTACAGTTCG TTGGTCCGGG
ACTGATGTCA CCATTGCGGT CGATGACCTC GCCAATTTTG CGCAGGGGCG CCCCGTCGGC
GCTGATCTGC GAGCGGTTTT GGCCTTGCTC TCACCGGAAG TCCAGCAGTC GATTCGTTCG
GCCTTGATTG CTCCCGTGCC CATCTCGCCC AACGCGATCC AGCAGATTGT CAATCGGGGC
GATACCTTCA GCATCTTTCT GACCCGTGTC GGCAATGTGA TCCGGGCGGA ACCACCTGTT
TCCCTAACTG ACCCAGCGAT CGCCACAGCC ATCACAACCG CAGCCCAATC GCCGCAAGGG
CTGTCATTTC TCAGTGCGAT TCAGACGTTT CCCTCCGAAA CCATCCTGTT CGATCTCAAT
GTCTTTTTGA GCTATATCCA GCAGCTCAAC GAGCAACTCT TAGCCACCGA AGGCGTTGTC
AATCGCTTGC AGCAACGGAG TCAGCCCGCC GATCCCGCAC TGCAGCAACG CTATCAAGCA
CCGGGGCCGA ACAGCGTTCA GGTCCAGAGC TTTAACTGGC AGGATCCCCA ACGCAATCGC
CCTGTGCCGA CGGATTTATA CCTGCCCAGC GGCACATCCC GCAATTTGCC CCTAGTGGTG
GTTTCCCATG GTTTGGGCGA AACGCGCCAG ACCTTTGCCT ATCTGGCACG CCATCTGGCT
TCCCACGGCT ATGCCGTCGC CCTGCCCGAG CATGTGACCA CCAGTGCGCG ATCGTTCGAG
AACGTCCTAG TCGGCATCAG CAGCCCGCCT GGACCTCAGG CCTTGATTGA TATTCCAACG
GACATTCGCT TTGTCCTAGA CCAGTTGGCT ACCACACCAG CCGCCGCTCG GGTTCAAACC
CAAAAAGCTG CGGTTGTAGG TCATTCCTAC GGAGGTTATG GGGCCTTGGC AGTGGCGGGC
GCCCCTCTCA GTCCGGTCAA TGCGCGACAG CAATGTGAAC CCCTCGATCG CTTCCGCAAT
AACCTCTCCA CCTTGTTGCA GTGCATCGCC ATTAACTTGC CGCAACCGAG CTATACCTTG
ACCGATCCCC GCATTGTGGC CGCTGTTGCT GCTGATGGCC TAGCCAGCGA TGTCTTTGGG
GCCGCCGGCC TCTCGCAGGT AACAGTTCCT ACCCTGATCT GGGGGGGAAG CCGCGATGTC
GTCACACCGC CCCAACCCGA GGCGATCGCT GCGTTTCAGC AGCTCGGCAC CCGTCAGAAG
TGGCTAGCTC TTGCCGTGAA AGGGACGCAC TTCACCGTGC TGCCACCCAA CAATCAGCAA
CCCCAAGGCT TCCAGATCCC TTTGCCACCC GAGTTGATCG GTCCTAGCCA AGCAGCAGGC
AACCTGCTGT TCCAAGGCTT GACCTTGGCC TTTCTCGATC AAACCTTCCG TGGGCAGCCG
GCCACACTCT TGCCCAGCAC TGGCACCACA ACCATCGCGA CTCCGGAACT GACAGTGCTC
GTGACACCAC AGTCTCCCTA G
|
|---|
| Protein sequence | MFKPQSWFPT LLSTVLGFGA AVLTAAPSSA AERITVRWSG TDVTIAVDDL ANFAQGRPVG
ADLRAVLALL SPEVQQSIRS ALIAPVPISP NAIQQIVNRG DTFSIFLTRV GNVIRAEPPV
SLTDPAIATA ITTAAQSPQG LSFLSAIQTF PSETILFDLN VFLSYIQQLN EQLLATEGVV
NRLQQRSQPA DPALQQRYQA PGPNSVQVQS FNWQDPQRNR PVPTDLYLPS GTSRNLPLVV
VSHGLGETRQ TFAYLARHLA SHGYAVALPE HVTTSARSFE NVLVGISSPP GPQALIDIPT
DIRFVLDQLA TTPAAARVQT QKAAVVGHSY GGYGALAVAG APLSPVNARQ QCEPLDRFRN
NLSTLLQCIA INLPQPSYTL TDPRIVAAVA ADGLASDVFG AAGLSQVTVP TLIWGGSRDV
VTPPQPEAIA AFQQLGTRQK WLALAVKGTH FTVLPPNNQQ PQGFQIPLPP ELIGPSQAAG
NLLFQGLTLA FLDQTFRGQP ATLLPSTGTT TIATPELTVL VTPQSP
|
|---|
| |