Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0385 |
Symbol | |
ID | 3774906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 377321 |
End bp | 378694 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637798791 |
Product | geranylgeranyl reductase |
Protein accession | YP_399404 |
Protein GI | 81299196 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02023] geranylgeranyl reductase [TIGR02028] geranylgeranyl reductase [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCCTG TCGTTCTGTT AACGTCTGTT TCAGCTTTGA CACAGACGCA AAAGCCCTGT CGGGGCCGAC GAAATGCCCG TGATAGGATC CCAACCTGTA GCCAAGAAAC GTTAGAGGGC AAAGCGTTGG CACTTCGGGT GGCTGTGGTC GGCGGCGGAC CGGCGGGATC TTGTGCAGCG GAAACGCTCG TCAAAGCCGG TATTGAGACT TATCTAATCG AGCGCAAGTT GGACAACGCA AAGCCCTGCG GCGGTGCAAT CCCGCTCTGC ATGGTCAGCG AGTTCGACCT GCCGGCGGAG ATCATCGATC GCCGCGTGCG CAACATGAAA ATGATTTCGC CGTCCAACCG CGAGGTCAAC ATCAATCTCG ACAATGCCGA CGAATACATC GGCATGACCC GTCGGGAGGT ACTGGATGGC TTCCTGCGCG ATCGCGCGGC CAAGCTGGGC ACCAAGCTGA TCAACGGTAC GCTCTTCCGT TTGGAACTGC CGAAGGGCGA TCGCGATCCC TACGTGCTGC ACTACGCCGA TCACTCCAAC GGCAGTCTAG AAGGCATTCC TTCGACCCTA GAAGTGGATG TGGTGATTGG GGCGGATGGC GCTAACTCGC GTATCGCCAA AGCGATCGAT GCGGGCGATT ACAACTACGC GATTGCTTTC CAAGAGCGCA TCCGTCTGCC TGAAGACAAG ATGCATTACT ACGAAAATCT GGCGGAAATG TACGTCGGTG GCGACGTTTC GCCCGACTTC TACGCGTGGG TGTTCCCCAA ATACGACCAC GTAGCAGTCG GTACGGGCAC GATGCATGTC AACCAACGCC TGATCAAGAA GCTGCAAGCA GGCATTCGCG CTCGGGCTGC AAACCGTTTG GAAGGCGGCA AGATCATCAA GGTCGAAGCA CACCCGATCC CCGAGCATCC GCGTCCGCGT CGGGTTGTTG GCCGGGCAGC ACTAGTTGGC GATGCGGCCG GCTACGTGAC TAAGTCTTCA GGTGAAGGCA TCTACTTCGC GGCCAAATCG GGTCGGATGT GTGCCGAAAC GATCGTCGAA ACCTCGAACA ACGGCGCTCG CATTCCTACC GAAGCGGATC TGAAGCAGTA TCTGCGTCGC TGGGACAAAA AATACGGCAC CACCTACAAA GTGCTGGACT TGCTGCAAAC CGTCTTCTAT CGCTCGGATG CAACCCGTGA AGCCTTCGTG GAAATGTGCG ACGACAAAGA TGTGCAGCGT CTGACCTTCG ACAGCTACCT CTACAAAACC GTGGTGCCGG CCAATCCCTT AGTGCAGCTA AAAATCACGG CCAAAACCCT CGGTAGCTTG CTACGCGGCA ATGCCTTGGC ACCAGCGGAA TATAAACCGA TCGATGCGGC TTAA
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Protein sequence | MDPVVLLTSV SALTQTQKPC RGRRNARDRI PTCSQETLEG KALALRVAVV GGGPAGSCAA ETLVKAGIET YLIERKLDNA KPCGGAIPLC MVSEFDLPAE IIDRRVRNMK MISPSNREVN INLDNADEYI GMTRREVLDG FLRDRAAKLG TKLINGTLFR LELPKGDRDP YVLHYADHSN GSLEGIPSTL EVDVVIGADG ANSRIAKAID AGDYNYAIAF QERIRLPEDK MHYYENLAEM YVGGDVSPDF YAWVFPKYDH VAVGTGTMHV NQRLIKKLQA GIRARAANRL EGGKIIKVEA HPIPEHPRPR RVVGRAALVG DAAGYVTKSS GEGIYFAAKS GRMCAETIVE TSNNGARIPT EADLKQYLRR WDKKYGTTYK VLDLLQTVFY RSDATREAFV EMCDDKDVQR LTFDSYLYKT VVPANPLVQL KITAKTLGSL LRGNALAPAE YKPIDAA
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