Gene Synpcc7942_0383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0383 
Symbol 
ID3774904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp375762 
End bp376448 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content47% 
IMG OID637798789 
Producthypothetical protein 
Protein accessionYP_399402 
Protein GI81299194 
COG category[S] Function unknown 
COG ID[COG5473] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCTA GCTCTTTCAA TAGCAACGAA GACTTACTCA ACCGCGACTA TGAGTTCCGA 
TTTGGTTCCT ATCTGTCTCG AGGCTGGGCA ATTTTCAAAC AGAACTTGGG CCTCTTCATC
GCCTACTTAA TTATTGTTGG CCTAATTTCC ATAGCTCTCT CCAGTTTAGA TGCCGCATTT
GTCGCAGATG AGGAGGGCAC TGGACTGCGC TTTGGACCAG GTGGAGCCAT TCAATTGGTC
ATTAATGGCC CACTCTCTGC TGGCTTTTTC TTAGTAGCCT TTAAAACGAT CAAGCAGCAA
CGGGTTGAGT TCGGTGACTT CTTTCGCGGC TTCAATCGCT TTCTACCCTT TTTTCTGACG
TCACTGCTAA CCAGTGCCTT AACACTGATT GGCTTTGTCC TCCTGATTGT TCCTGGAATC
TATCTAGCGA TCGCCTATGT ATTTGCCCTA CCTCTTGTCG CAGAGCGAAA CCTTGAGCCT
TGGGCAGCCT TGGAGTTGAG CCGCCGTTTA ATCACCAAAA AGTGGTTGAC TTTTTTTGGC
TTTTTGATTG TTCTGGGTCT GATTAACTTT GCTGGAGCAT TACCCTGCGG AATTGGCCTG
CTATTTACGA TCCCTTGGTC CATTTGTGCA ATCACAGCAG CCTACGAAGA TATTGTCGGG
ATTGCCAATT CGTCAGAAGA TGCTTGA
 
Protein sequence
MASSSFNSNE DLLNRDYEFR FGSYLSRGWA IFKQNLGLFI AYLIIVGLIS IALSSLDAAF 
VADEEGTGLR FGPGGAIQLV INGPLSAGFF LVAFKTIKQQ RVEFGDFFRG FNRFLPFFLT
SLLTSALTLI GFVLLIVPGI YLAIAYVFAL PLVAERNLEP WAALELSRRL ITKKWLTFFG
FLIVLGLINF AGALPCGIGL LFTIPWSICA ITAAYEDIVG IANSSEDA