Gene Synpcc7942_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0380 
Symbol 
ID3774901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp373785 
End bp374828 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content57% 
IMG OID637798786 
Producthypothetical protein 
Protein accessionYP_399399 
Protein GI81299191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCAG ACGATTTCTC GGTATTGCCC TCAGAACCAG AAACGCCGCC TGTGTTGTTA 
CCAGAGCTGG GGCGAGAGCC AGAAACGCCG GCTGAGCCAG CACTGGAGCT GCCTGCGCCC
GAATCCTCTT TGACTGAGGA GACTGTGGCG ACACCCGTGG AAGATTCGCC CCCACCGGCC
GAAGCGTCAC TGCAGCGTCT CACCGCGATC GCGCTAGCCG ATTTAGAAGC GCGACAAGCT
GCTCTCTTGG CTTCGATTGA AAAACTGGAG CGCCGCCGCG ATCGCATCCA GCAGGAAATT
CGCAGCAGCT TTGCCGGCAA ATCCCAAGAG ATTGCTGTGC GGGTTCAGAG TTTTAAAGAT
TACCTAGTTG GCAGTCTGCA AGACCTAGCC GCCTCGGCAG AGCAACTGGA TTTAGTCCCC
CCACAACCGA TCGCTGCCCC TGAAATCATT GCGCCTCCCC CTGCATCAGT AGAAGCAAAA
GCACCTCTGC GGCCTGGCTT TGCGGATCCC GAATTTGCCC CCGAAGCCGA ATTGATCGAG
CAAGAACTGA ATCGCTATCG CCAGTCACCG GACTACTACG GTCAGCCGTG GGTGCTGCGT
CGCACCTTCG AAGCAGTTCA TGAAGAGCCA GTCCGCGAGT GGTTTTTTAC GATGGGCGGC
CGGGGTGCGC TCCGTAGTTT TGGTAGTCGC CAGCAAAATG TCCTGATTGC TTCAGCTGTG
ATTTCCGTGC TCAATCACCT CTACGGTGAG CGCTTAGTAC CGCTGATTTT GGCGAGTACG
CCGGAACGAC TGGGTGAATG GCGGCGCGGC TTGCAGGATT GCTTGGGTCT ATCGCGGGAA
GATTTTGGCC CAAATCAAGG TATTACGCTA TTTGAGTTTG CCGATGCGCT GGTTCAAAAA
GCCGAACGCA TCGAAGAGCG GGGTGATCTG CCTCTGATCG TGATTGACGA CGGTGAAGAC
AGTGTCAGTC TGTCCCTGTT GCAGTTCCCG CTGTGGCTGG CCTTTGCTCC CGATCCGCGC
CAGCCCAGCT ACGACTTGTT TTGA
 
Protein sequence
MLPDDFSVLP SEPETPPVLL PELGREPETP AEPALELPAP ESSLTEETVA TPVEDSPPPA 
EASLQRLTAI ALADLEARQA ALLASIEKLE RRRDRIQQEI RSSFAGKSQE IAVRVQSFKD
YLVGSLQDLA ASAEQLDLVP PQPIAAPEII APPPASVEAK APLRPGFADP EFAPEAELIE
QELNRYRQSP DYYGQPWVLR RTFEAVHEEP VREWFFTMGG RGALRSFGSR QQNVLIASAV
ISVLNHLYGE RLVPLILAST PERLGEWRRG LQDCLGLSRE DFGPNQGITL FEFADALVQK
AERIEERGDL PLIVIDDGED SVSLSLLQFP LWLAFAPDPR QPSYDLF