Gene Synpcc7942_0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0355 
SymbolrbfA 
ID3774876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp348457 
End bp348870 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID637798761 
Productribosome-binding factor A 
Protein accessionYP_399374 
Protein GI81299166 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.417644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.687785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA ATCGTCGGGT AGAACGAGTC GCGTCACTGA TTAAGCGCGA AGTCAGTCAG 
ATGTTGATGA GCGGTATTAA GGACGATCGC GTTGGGGCAG GCATGGTCAG CGTCACCGAT
GTGGTGGTAT CGGGCGACCT GCAACACACC AAGATTTTCG TCAGCATCTA CGGCACGCCC
GAAGCCAAAG CCGAAACGAT GGAAGGGCTG AAATCAGCTG CTTCCTATGT GCGCAGTGAG
CTAGGGCAAC GGGTTCGTCT GCGGCGCACG CCCGAAGTGA TCTTTGTGGA AGACAAAGGG
TTGGAGCGCG GTACGCAAGT GATTTCGCTA CTGGAACAAT TGACGCGGGA GCGCGAAGCT
CGCGAAGCGG CTCAGGCTGC GGCTGGTGTT GTGGACTCGA CTGAAGACGC TTGA
 
Protein sequence
MATNRRVERV ASLIKREVSQ MLMSGIKDDR VGAGMVSVTD VVVSGDLQHT KIFVSIYGTP 
EAKAETMEGL KSAASYVRSE LGQRVRLRRT PEVIFVEDKG LERGTQVISL LEQLTREREA
REAAQAAAGV VDSTEDA