Gene Synpcc7942_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0352 
Symbol 
ID3774873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp344823 
End bp345431 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content58% 
IMG OID637798758 
Productmethionine sulfoxide reductase B 
Protein accessionYP_399371 
Protein GI81299163 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG TCAAGCATCA GTCCAGGTTT CTCTGCAAAA TCGCCACAAT AGAGAGCGAT 
CGCTCTTGTT TAATCGCTGC CATGACTGCT GCTGCCCCAA CTCTCTCGCG TCGTCGTCTC
CTGCTCGGTT TGGTCAGTGC TGGCGCTGGG GCGGGGGGAT TTCTGTTCTG GCGTCAGTCG
CGATCGCCGC TTTCCAGCAC GGATGCTGTC TATCCCATGC AGCTAAGTGA GGCTGAATGG
CAGCAACGCT TGTCTCCCGA GGCCTATGCA GTCCTGCGGG AAGCCGCGAC AGAACGGCCT
TTTACAAGCG ATCTTTTGGC AGAAAAACGA GTCGGTCAAT ACTGCTGCGC TGGCTGCGAG
CAGCCTTTGT TTGAGTCCGC CGCCAAGTAT GAGAGTGGAA CGGGCTGGCC CAGTTTTCGC
GAAGCGATCG CGGGCAGTCT CGGTTTCCAA ACCGACTACA AACTAGTGGT TCCGCGCACG
GAATACCACT GCAGCCGCTG CGGTGGACAC CAAGGCCATG TTTTCAACGA TGGACCCGCC
CCCACCGGCA AACGCTTCTG CAACAACGGC GTGGCGATCG CCTTCGTACC CGCTGCTGAT
CAGGGCTGA
 
Protein sequence
MAIVKHQSRF LCKIATIESD RSCLIAAMTA AAPTLSRRRL LLGLVSAGAG AGGFLFWRQS 
RSPLSSTDAV YPMQLSEAEW QQRLSPEAYA VLREAATERP FTSDLLAEKR VGQYCCAGCE
QPLFESAAKY ESGTGWPSFR EAIAGSLGFQ TDYKLVVPRT EYHCSRCGGH QGHVFNDGPA
PTGKRFCNNG VAIAFVPAAD QG