Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0352 |
Symbol | |
ID | 3774873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 344823 |
End bp | 345431 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798758 |
Product | methionine sulfoxide reductase B |
Protein accession | YP_399371 |
Protein GI | 81299163 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATCG TCAAGCATCA GTCCAGGTTT CTCTGCAAAA TCGCCACAAT AGAGAGCGAT CGCTCTTGTT TAATCGCTGC CATGACTGCT GCTGCCCCAA CTCTCTCGCG TCGTCGTCTC CTGCTCGGTT TGGTCAGTGC TGGCGCTGGG GCGGGGGGAT TTCTGTTCTG GCGTCAGTCG CGATCGCCGC TTTCCAGCAC GGATGCTGTC TATCCCATGC AGCTAAGTGA GGCTGAATGG CAGCAACGCT TGTCTCCCGA GGCCTATGCA GTCCTGCGGG AAGCCGCGAC AGAACGGCCT TTTACAAGCG ATCTTTTGGC AGAAAAACGA GTCGGTCAAT ACTGCTGCGC TGGCTGCGAG CAGCCTTTGT TTGAGTCCGC CGCCAAGTAT GAGAGTGGAA CGGGCTGGCC CAGTTTTCGC GAAGCGATCG CGGGCAGTCT CGGTTTCCAA ACCGACTACA AACTAGTGGT TCCGCGCACG GAATACCACT GCAGCCGCTG CGGTGGACAC CAAGGCCATG TTTTCAACGA TGGACCCGCC CCCACCGGCA AACGCTTCTG CAACAACGGC GTGGCGATCG CCTTCGTACC CGCTGCTGAT CAGGGCTGA
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Protein sequence | MAIVKHQSRF LCKIATIESD RSCLIAAMTA AAPTLSRRRL LLGLVSAGAG AGGFLFWRQS RSPLSSTDAV YPMQLSEAEW QQRLSPEAYA VLREAATERP FTSDLLAEKR VGQYCCAGCE QPLFESAAKY ESGTGWPSFR EAIAGSLGFQ TDYKLVVPRT EYHCSRCGGH QGHVFNDGPA PTGKRFCNNG VAIAFVPAAD QG
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