| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0336 |
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| Symbol | |
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| ID | 3774857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 330878 |
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| End bp | 332395 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637798742 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_399355 |
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| Protein GI | 81299147 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.120732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAGCA TCAGACCCGA CGAAATTAGC AGCATCATTC GTCAGCAGAT TGAGCAGTAC
AGCCAAGACG TCAAAGTTGA AAACGTCGGT ACCGTTCTGC AGGTGGGTGA CGGCATTGCC
CGCATCTATG GTCTGCAGCA GGTGATGTCT GGCGAGTTGG TGGAGTTCGA AGATGGCACC
ACCGGCATCG CGCTCAACTT GGAAGAAGAC AACGTCGGTG CGGTGTTGAT GGGCGAAGGC
CGCAACATCC AAGAGGGCAG CACGGTTAAA GCGACCGGCA AAATCGCTCA GATTCCGGTC
GGTGATGCAC TGGTTGGCCG TGTGGTCAGC CCCTTGGGTG CGCCGTTGGA CGGCAAAGGT
GAAATTGCGG CAACCGAAAA TCGCCTGATC GAATCGCCGG CTCCTGGCAT CATTGCGCGT
CGCTCGGTGC ATGAGCCCAT GCAGACCGGT ATTACCGCGA TCGACGCGAT GATTCCGATC
GGCCGGGGCC AGCGCGAGCT GATCATCGGT GACCGTCAGA CCGGCAAAAC CGCAATCGCG
ATCGACACGA TTCTGAACCA GAAAGGCGAA GACGTAATTT GCGTCTACGT CGCGATCGGT
CAGAAAGCCT CTTCGGTTGC CAACATCATT GAAGTCCTGC GGGAACGCGG TGCCCTCGAT
TACACCGTGG TCGTTGCGGC CAACGCTTCA GAACCGGCAA CGCTGCAATA CCTGGCTCCC
TACGCCGGTG CTGCGATCGC CGAGTACTTT ATGTGCAAAG GCAAAGCCAC CTTGGTCATC
TACGATGACT TGACCAAGCA AGCGCAGGCT TACCGCCAGA TGTCGCTGCT GCTGCGTCGT
CCGCCCGGTC GGGAAGCTTA CCCCGGCGAT GTTTTCTACC TCCACAGCCG TCTGCTGGAA
CGCGCCGCTA AACTGTCGGA CGCTCTTGGT GGTGGCAGCA TGACTGCCCT GCCGGTGATC
GAAACCCAAG CCGGTGACGT CTCGGCCTAC ATTCCGACCA ACGTGATCTC GATTACGGAC
GGTCAAATCT TCCTGTCCTC TGACCTGTTC AACTCGGGTC TGCGTCCGGC TATTAACGTC
GGTATCTCGG TTAGCCGGGT CGGTTCCGCT GCTCAAACCA AGGCGATCAA GAAAATTGCT
GGCACATTGA AGCTGGAATT GGCTCAGTTT GATGAGCTGG CGGCCTTTGC TCAGTTTGCA
TCTGACTTGG ACAAAGCCAC TCAAAACCAG TTGGCTCGCG GTCAGCGTCT GCGTGAGCTG
CTGAAACAGC CTCAGTTCTC GCCGTTGATT CTGGCGGAAC AAGTAGCAGT GGTCTACGCC
GGTGTTAAAG GTCTGATCGA CGAGATTCCG GTCAACCAAG TCACGGCCTT CGTTTCTGAG
CTGCGCTCCT ACCTGAAGAC CAGCAAGCCT GAGTTCATCG AGAAAGTTCA AAGCTCGAAA
CAACTCGATG ACGCCGCTGA AGCATTGCTG AAAGAAGCGA TCGCGGAAGT GAAGAAAAAC
ATCTTGGCTG CTGTCTAG
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| Protein sequence | MVSIRPDEIS SIIRQQIEQY SQDVKVENVG TVLQVGDGIA RIYGLQQVMS GELVEFEDGT
TGIALNLEED NVGAVLMGEG RNIQEGSTVK ATGKIAQIPV GDALVGRVVS PLGAPLDGKG
EIAATENRLI ESPAPGIIAR RSVHEPMQTG ITAIDAMIPI GRGQRELIIG DRQTGKTAIA
IDTILNQKGE DVICVYVAIG QKASSVANII EVLRERGALD YTVVVAANAS EPATLQYLAP
YAGAAIAEYF MCKGKATLVI YDDLTKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
RAAKLSDALG GGSMTALPVI ETQAGDVSAY IPTNVISITD GQIFLSSDLF NSGLRPAINV
GISVSRVGSA AQTKAIKKIA GTLKLELAQF DELAAFAQFA SDLDKATQNQ LARGQRLREL
LKQPQFSPLI LAEQVAVVYA GVKGLIDEIP VNQVTAFVSE LRSYLKTSKP EFIEKVQSSK
QLDDAAEALL KEAIAEVKKN ILAAV
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