Gene Synpcc7942_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0334 
Symbol 
ID3774855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp329764 
End bp330279 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content55% 
IMG OID637798740 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_399353 
Protein GI81299145 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.603951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTT GGATTTTGCT CGCGCATGCT GAGACCTCTG GGTTCGGTCT CAATCTTGAT 
CTCTTTGAAA CGAACCTGAT CAACCTGGCG ATCATCATTG GTCTCTTGGT CTATGCAGGT
CGAGGTTTCC TCGGCAATTT GCTCAGCAAC CGTCGCGCTG CGATCGAAGC AGAAATCCGT
GAGGTTGAAG AGAAGCTGGC ATCGTCTGCC CAAGCCCTGA GCCAGGCTCA GACCCAACTG
AAAGAGGCAG AAGCTGAAGC GGCTCGCCTG TTGGTTGAAG CCAAAGCCCG TGCAGCAGCG
GTACGCCAAG AAATTTTGGA CAAAGCAGCT GCGGATGTTG AACGCTTGAA AGCCACTGCT
GCTCAAGATG TCAGCACTGA GCAACAGCGT GTGCTGGACG AACTGCGCCG CTATGCAGTT
GCCCAAGCCT TGAGCCGGGT TGAGACGCAA CTGTCTCAGC AGTTGGATGA GGCCGCCCAA
CAGCGCTTGA TCGATCGCAG CTTGGCTACG CTCTAG
 
Protein sequence
MSSWILLAHA ETSGFGLNLD LFETNLINLA IIIGLLVYAG RGFLGNLLSN RRAAIEAEIR 
EVEEKLASSA QALSQAQTQL KEAEAEAARL LVEAKARAAA VRQEILDKAA ADVERLKATA
AQDVSTEQQR VLDELRRYAV AQALSRVETQ LSQQLDEAAQ QRLIDRSLAT L