Gene Synpcc7942_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0331 
Symbol 
ID3774852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp327926 
End bp328711 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content55% 
IMG OID637798737 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_399350 
Protein GI81299142 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.151376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTCCG CAACCCTTCC TTCCGACCTC ATGTCCATGC CGACTCTACT CGAACTCTCG 
TCAGTTTTGC CTCTCGCCGA GCTCGAGGTC GGCCAGCATT TTTACTGGCA GATCGGCAAC
TATCGGCTTC ACGGCCAGGT CTTTTTGACT TCTTGGTTCG TGATCGCGGC CTTGGTGGTG
CTGTCTCTCC TGGCGAATCG CAATCTTCAG CGCATTCCCA GCGGCCTCCA GAATTTCATG
GAGTACGTTC TGGACTTCAT CCGTAACCTA GCCCGCACCC AGATCGGCGA AAAGGAATAT
CGTCCTTGGG TTCCGTTTAT TGGTACCCTG TTTCTGTTTA TTTTCCTGTC CAACTGGTCC
GGCGCTCTCA TCCCTTGGAA GCTGATCAAG CTCCCTTCGG GCGAATTGGC TGCCCCGACC
AGTGACATCA ACACCACCGT AGCGCTCGCG CTATTGACCT CGCTGGCGTA CTTTTACGCC
GGTTTCAGCC GCAAAGGGCT GGGATATTTT GGCAACTACG TCCATCCCAC GCCGGTGATG
CTGCCCTTCA AAATTTTGGA GGACTTCACC AAACCCTTAT CCCTGAGCTT CCGTCTGTTT
GGAAACATCT TGGCAGACGA ACTTGTGGTG GCGGTTCTCG TGCTGTTGGT GCCTCTCTTC
GTGCCGCTGC CAGCAATGAT TCTGGGCTTG TTTACCAGTG CGATTCAAGC GTTGATCTTT
GCAACCTTGG CTGCGTCATA CATCGGCGAA GCCGTCGAAG AGCATGGTGA GGAACACGCC
GAGTAG
 
Protein sequence
MGSATLPSDL MSMPTLLELS SVLPLAELEV GQHFYWQIGN YRLHGQVFLT SWFVIAALVV 
LSLLANRNLQ RIPSGLQNFM EYVLDFIRNL ARTQIGEKEY RPWVPFIGTL FLFIFLSNWS
GALIPWKLIK LPSGELAAPT SDINTTVALA LLTSLAYFYA GFSRKGLGYF GNYVHPTPVM
LPFKILEDFT KPLSLSFRLF GNILADELVV AVLVLLVPLF VPLPAMILGL FTSAIQALIF
ATLAASYIGE AVEEHGEEHA E