| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0328 |
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| Symbol | |
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| ID | 3774849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 323781 |
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| End bp | 325898 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637798734 |
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| Product | phycobilisome core-membrane linker polypeptide |
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| Protein accession | YP_399347 |
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| Protein GI | 81299139 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.546381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTTA CGGCCAGTGG CGGCAGCTCA CTTGCACGCC CGCAACTCTA CCAAACGGTT
CCTGGCTCGA CGATTGTTCA GGCAGAACAA CAAGACCGCT TCCCGCAACA GGGTGAGCTG
CGCGAGCTTT CGAGCTACTT CCAGTCCGGC CTCAAACGGC TGGCGATCGC AGAAATCATC
ACTCGGAATT CCGACACGAT TGTCTCGCGA GCAGCCAACC GGATTTTTGT CGGTGGCTCA
CCCCTTGCTT ATATTGAGCG CCCCAAAGTT GACCCTCGCA ATCTCCGCAG TGCGGAAGAA
CAGCGCGCCC GCGAAGCGAA GCTCGGCACC GTCACCTTCG TCGAAAGTAG TGGTGGCGGT
GGCTTCTTCA GCGGTTTGAC CGCTGCCCTG GGTGGTGCAG GTGCCGTGCG GATTCCTTCG
GGGTTCCGAC CAATTAACGT GGCGCGCTAT GGCCCGCGCA ACATGCAGAA ATCATTGCGC
GACATGAGCT GGTTTCTGCG CTACATCACC TACGCGATCG TGGCGGGCGA CCCCAATATC
TTGGTTGTCA ACGTCCGCGG TCTGCGCGAA ATCATTGAGA AAGCTTGCTC CACGCCTGCG
ACGCTGGTGG CTCTACAGGA TATGCGGGCG ACCAGTGCCG GCTACTTCCG CAACGATCCT
GAAGCCCAGC AACTGGTCAA AGACTACTTT GACGTGCTGA TTCGGGAGTT CGAAGCCCCG
ACTCCATCGC TGAAGCAGCG CCAGCGTTTT GCTGAGGATC AACAGGGACT GGCACTGCCC
CAAAGCTATG CCAACGCAGC TGAACGGCGT CCTAAATTTG TGATCAAGTC GACCCTGTCG
ACCGTTGAGA AGAATGAAGC GATCAAAGCG GCCTATCGCC AAGTCTTTGA ACGGGACATC
ACCCGCGCTT ACAGCCAGAA GGTTTCTGAC CTAGAATCCA AGGTTAAAAA CGGCGAGATC
TCAACCAAAG AATTTATCCG CCGCTTGGGT AAATCACCGC TCTACCGTCA GCAATTCCAC
GATCGCTTCG TCAATAGCCG CGTGATCGAG CTGGCCTTCC GCCACTTCTT GGGTCGCGGC
ATCAGCTCTG CTGAGGAGTT CACCCGCTAC TTCGATCTGC TCAGTGCCAA GGGCTTTGCA
GCATTGATCG ATGCCTTGGT GGATTCGCAG GAATACGCAG ACTACTTCGG CGAAGAAACC
GTGCCTTACC TGCGCGGTCT GGGTCAAGAA GCACAAGAGT GCCGCAACTG GGGCGTTCAG
CAAGAGCTGT TCAAATACAG CGCACCCTTT GTCAAAGTGC CGCAGTTTGT CACTCTGTTT
GGGGAATACA AGCAGCCTCT GCTCGATCAA CACCCCTACG GTGCTGGCAA CGACCCGCTG
GAAATTCAGT TCGGGGCCAT CTTCCCCTCA CGCACGGTCA ACAACCGCAC CAATCCAGCC
CCCTTCGGCA AAGATACTCG TCGCTTGCTG GTCTCCAAGG GCGGCGTCAA CAACCAAGTG
GGCAGCGCCG CTTTCCAACA AAGTGGCACC ACGCCAACCA AGATTTTCAA ACTCACCCAA
GTCGCTGCTG GTAGCAGCTC GATACGCAGC AAATCGGTCG GCAATCCCAG TATTCGCCAA
ACCGAAAGCA CCACTCAAGC CGTGATTCGG GCCGCCTATC GGCAAGTCTT TGGCCGCGAC
CTCTACGAAG GTCAGCGTCT GACGGTACCG GAAATCAAGC TCGAAAACGG TGAAATCACC
GTGCGGGAGT TTGTGCGTCA GATCGCCAAG TCTGAAACCT TCCGGAAGCT CTACTGGAAC
AACCTCTACG TCGTCAAAGC CGTGGAGTAC ATCCATCGCC GCTTGCTGGG CCGTCCCACG
ACGGGTCGTG CCGAGATTAA CGCCTACTTC GACATCTCAG CGAAGAAAGG CTTCTATGCC
CTTGTGGATG CGATTCTCGA CAGTCCCGAG TACATTGCTG CCTTCGGGGA AGATACGGTG
CCCTACGAGC GCTATATCAC CCCCAAAGGC TTGGCTCTGC GTTCTGTGCG TGGCCTAGAG
GCCTCTGAGA AGGTCAAAGC GTCGCTCCGA CCCGCTGCTG GGGCCCAGGA ACGCCGTCCA
GAGGTTGGCC GTCGCTAG
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| Protein sequence | MTVTASGGSS LARPQLYQTV PGSTIVQAEQ QDRFPQQGEL RELSSYFQSG LKRLAIAEII
TRNSDTIVSR AANRIFVGGS PLAYIERPKV DPRNLRSAEE QRAREAKLGT VTFVESSGGG
GFFSGLTAAL GGAGAVRIPS GFRPINVARY GPRNMQKSLR DMSWFLRYIT YAIVAGDPNI
LVVNVRGLRE IIEKACSTPA TLVALQDMRA TSAGYFRNDP EAQQLVKDYF DVLIREFEAP
TPSLKQRQRF AEDQQGLALP QSYANAAERR PKFVIKSTLS TVEKNEAIKA AYRQVFERDI
TRAYSQKVSD LESKVKNGEI STKEFIRRLG KSPLYRQQFH DRFVNSRVIE LAFRHFLGRG
ISSAEEFTRY FDLLSAKGFA ALIDALVDSQ EYADYFGEET VPYLRGLGQE AQECRNWGVQ
QELFKYSAPF VKVPQFVTLF GEYKQPLLDQ HPYGAGNDPL EIQFGAIFPS RTVNNRTNPA
PFGKDTRRLL VSKGGVNNQV GSAAFQQSGT TPTKIFKLTQ VAAGSSSIRS KSVGNPSIRQ
TESTTQAVIR AAYRQVFGRD LYEGQRLTVP EIKLENGEIT VREFVRQIAK SETFRKLYWN
NLYVVKAVEY IHRRLLGRPT TGRAEINAYF DISAKKGFYA LVDAILDSPE YIAAFGEDTV
PYERYITPKG LALRSVRGLE ASEKVKASLR PAAGAQERRP EVGRR
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