Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0319 |
Symbol | |
ID | 3774840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 316162 |
End bp | 316980 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637798725 |
Product | hemolysin A |
Protein accession | YP_399338 |
Protein GI | 81299130 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1189] Predicted rRNA methylase |
TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTAAGC ACCGTTTAGA TGCTCTGTTG GTGGAACGTG GACTCTGCCC CTCGCGGCAG CAGGCCCAAC GGCTGATTCG TGCTGGTGAA GTGCGGGTCG CCCAAGCGAT TGTCGATAAA CCGGGGAGCC TGGTGGCTGA AGATGCCGTG ATTGAAGTTG CGGCCAAGCC GCCCTACGTT TCGCGAGGTG GCGAAAAGCT GGCAAAAGCC TTAGCAACGT TTCCGATCGC GCTCAGCGAT CGCATCTGTT TGGATGCGGG TATCTCCACC GGCGGTTTCA CCGACTGCTT GTTGCAGGCA GGGGCGAGCA AAGTCTATGG CATTGATGTG GGCTACGGTC AGGTTGACTG GAAGATCCGT ACTGACCCGC GAGTCCTTCT GCGGGAGCGA ACCAACATCC GCAACCTGCA GCCGACTGAC CTCTACGGAT CCGATGATGT TTGGCCCGAT CTAGCCGTCG CCGATCTCTC GTTCATCTCT CTGACGAAGG TGTTGCTGAC CTTGGGGCAG TTGTTGCGAT CGCCCCGCGA GCTGATTTTG CTGGTCAAGC CCCAGTTCGA GGTTGGGCGC GAAAAAGTCG GTAAAGGCGG GGTTGTCCGC GATCGCAAGG ATCATGTGAC GGCGATCGCT CAAGTTCTTG AGTCGGCTCA GGGGTTGGGC TGGCACGGCC AAGGATTGAC TTGGTCGCCG CTACTGGGGC CGGCGGGCAA TGTTGAGTAT CTGCTCTGGT TGAGTGAAGC AGAAACGACT TGGGCTGGCG ATCGTGCGGC GATCGAGGCC CTCACAACTG AGGCGATCGC GACCCTGCGT GCCGGATAA
|
Protein sequence | MAKHRLDALL VERGLCPSRQ QAQRLIRAGE VRVAQAIVDK PGSLVAEDAV IEVAAKPPYV SRGGEKLAKA LATFPIALSD RICLDAGIST GGFTDCLLQA GASKVYGIDV GYGQVDWKIR TDPRVLLRER TNIRNLQPTD LYGSDDVWPD LAVADLSFIS LTKVLLTLGQ LLRSPRELIL LVKPQFEVGR EKVGKGGVVR DRKDHVTAIA QVLESAQGLG WHGQGLTWSP LLGPAGNVEY LLWLSEAETT WAGDRAAIEA LTTEAIATLR AG
|
| |