Gene Synpcc7942_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0313 
Symbol 
ID3774834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp311762 
End bp312274 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content54% 
IMG OID637798719 
Producthypothetical protein 
Protein accessionYP_399332 
Protein GI81299124 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.967815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGA TTTTGTCCTT GCACACGCTT TGGCGGCACT GTTGTCGCAG CCTGATTCTC 
ATCGCGATCG CAGGTCTAGC TTGGAGTTGG ATTGCGCCAG CGGCGATCGC TCTCGATTTC
ACCAAGGAAA TCCTCATTGA GTCCAATTTC TCCAACCGCG ATCTCAGCGA TGCCAACTTT
ACGAAGGCCA ATCTACGCAG CAGCGACTTC AGTAACTCGG TGCTAGTGGG GGTTCGATTC
TACGGGGCGA ACTTGGAGAG CGTCGATCTT CACGGAGCTG ACCTCAGTAA CACCATTCTC
GATCAGGCGC GGATGACTAA CACTGATCTC ACCGACGCCA TTCTGGAAGG TGCCTATGCC
TTTAACGCAC TCTTCCAAGG TGCCAAGATT ACGGGCGCGG ATTTCACCGA TGTGTTGATG
CGCCAAGATG CCCAAGATTT ACTGTGCAGT GTGGCAGAAG GCGTCAATTC TAAAACCGGA
CGAGCCACCC GCGACACCTT GGATTGCCCT TAG
 
Protein sequence
MPVILSLHTL WRHCCRSLIL IAIAGLAWSW IAPAAIALDF TKEILIESNF SNRDLSDANF 
TKANLRSSDF SNSVLVGVRF YGANLESVDL HGADLSNTIL DQARMTNTDL TDAILEGAYA
FNALFQGAKI TGADFTDVLM RQDAQDLLCS VAEGVNSKTG RATRDTLDCP