Gene Synpcc7942_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0311 
SymbolksgA 
ID3774832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp310414 
End bp311253 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content58% 
IMG OID637798717 
Productdimethyladenosine transferase 
Protein accessionYP_399330 
Protein GI81299122 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.415808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCTC GCAAACGCTT TGGTCAACAT TGGCTCCGTA GCGAAGCCAT CCTCGATCGC 
ATTGTGGCGG CCGCTGAGCT GCGGCCCAGC GATCGCGTTT TAGAGATTGG TCCGGGGCGG
GGGGCGCTGA CTCAACGACT GCTGGCGGCA GTGGACGGGC TGGTTGCCGT TGAACTCGAT
CGCGACCTAA TCGGTCAGCT CCAGCAACGG TTTGGACAAG CCGAGAACTT TTGCCTGCTG
GAAGGCGACA TCCTCCAGCT TGATTGGACT GCTGCGATCG CCGATCGACC CCGCTTCGCC
AACCCCAGCA AAGTCGTCGC CAACATTCCC TACAACATCA CTGGCCCGAT CCTACAATCG
CTATTGGGCA CGATCGCCCA GCCACGGCGA CCCGCTTTTG AACGCCTCGT CCTGCTCGTG
CAGCAAGAAG TCGCCGATCG TCTCTGTGCC ACACCGGGAC AACGTGCCTA CGGCGCTTTG
TCGGTGCGAG TGCAGTATCT AGCCAGCTGC GAGCGAGTTT GTGCCGTACC CCCCAAGAGT
TTTTCACCAC CACCCAAGGT TCAGTCCACG GTCATTTGCC TGAAGCCACG CCCTTGGCCC
CAGGTCTGCA ACAATCCAGG GCGACTAGAA AAACTGCTGA ACCAAGGCTT TAGCGCCAAG
CGCAAAATGC TGCGCAATAA TCTCAAGTCA CTCTATAGCA GCGAGCAAAT TGAAGCAGCG
TTTGCTGCTC ATCAGATTGC GCCCGAAGCC CGCGCCGAAA CCCTGAGCAT TGATCAGTGG
ATTGGCCTCT GTACCGATCT GGGCGATCCT ACAGACAGCG CCATTAACCC GACTGCATGA
 
Protein sequence
MPARKRFGQH WLRSEAILDR IVAAAELRPS DRVLEIGPGR GALTQRLLAA VDGLVAVELD 
RDLIGQLQQR FGQAENFCLL EGDILQLDWT AAIADRPRFA NPSKVVANIP YNITGPILQS
LLGTIAQPRR PAFERLVLLV QQEVADRLCA TPGQRAYGAL SVRVQYLASC ERVCAVPPKS
FSPPPKVQST VICLKPRPWP QVCNNPGRLE KLLNQGFSAK RKMLRNNLKS LYSSEQIEAA
FAAHQIAPEA RAETLSIDQW IGLCTDLGDP TDSAINPTA