Gene Synpcc7942_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0292 
Symbol 
ID3773854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp288534 
End bp289760 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content58% 
IMG OID637798698 
Productbifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_399311 
Protein GI81299103 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCGA TCGCCTCTTT TGCCGGTCGT CGGATTCTGA TTGGTGTCTG CGGCGGCATT 
GCGGTCTATA AACTCTGCGA AGTGGTCTCC CAGTTGGTGC AGGCCGGTGC AGAGGTGCGC
GTCATTCTGA CAGCGGGGGC GGAGCGGTTT ATTGCTCCCT TCAGTTTCAG TACTCTCTGT
CGCCATCCCG CCTATACGGA CGCTGATTTT TGGTCAGCTC GTCATGGTCG TCCGCTCCAT
ATCGAGTTGG GGGAATGGGC GGAAGTGATG CTGATCGCCC CGCTGACTGC CAATACCCTC
GCGAAGTTGC GCTATGGGCA GGCCGATAAT CTACTGACCA ATACAGTCCT CGCGACGACT
GCCCCACTCT TGCTCGCCCC CGCCATGAAT ACGGATATGT GGCTGCAGCC CATCGTCCAA
GAAAACTGGC AGGTTCTGCG ATCGCGCCCT CAGACCTTGG GCCTAGAACC GGGGAGCGGT
CGTTTAGCTT GCGATCGCGT CGGCAGTGGT CGCTTGCCAG AACCGATCGC GATTCTGGCA
GGGTTGGAAT CGTTGCTCTG GACCCAGGGA CAAGCCGATC TGCAAGGGCT GAAGATTCTG
GTCAATGCGG GTGGCACCCG CGAGTTTCTC GATCCGGTGC GCTTTATCGG CAATCCCAGT
AGCGGGCGGA TGGGCGTGAT GCTAGCGATC GCGGCCCAAC ATCGCGGTGC TCAAGTCCAG
CTGATTCACG CGCCTTTGAC CAACATCGAG CCGGGGCTGT TGACGAGCCT CGATCGCCAA
GCGGTAGTCA GTACCGAAGA ACTGGCTGAA GCGATGATTG CCGCAGCCCC GATTGCAGAT
TGGGTTTTAC TCGCAGCAGC CGTGGGCGAT GTCCGGCCGG AACTGCGATC CCACCAGAAG
CTGAGTAAGG CTGAACTACC AGCCTCACTG CCACTACAAC TGTTACCCGA CATTGCGGCG
CAGCTCAGTC AGCAGCGGTA TCCAAACCAG AAGTTGATCG GGTTTGCTGC CCAAACTGGC
GAGATTTTGG AACCCGCGAT CGCGAAATTG CAGCGCAAGG GACTCGACGC CATCATCGCC
AACGCGATCG ATCAGCCCGG TCAAGGCTTT GGCAGTGCCA CTAATGCCGC GATCGCGCTG
CGTCCTGATG GCTCATCCCA GCCCTTGGGG TTCCGCAGCA AACTTAGCTT GGCTCATGCC
ATCTTAGATT TTGTTAAAAA TCTTTAA
 
Protein sequence
MTAIASFAGR RILIGVCGGI AVYKLCEVVS QLVQAGAEVR VILTAGAERF IAPFSFSTLC 
RHPAYTDADF WSARHGRPLH IELGEWAEVM LIAPLTANTL AKLRYGQADN LLTNTVLATT
APLLLAPAMN TDMWLQPIVQ ENWQVLRSRP QTLGLEPGSG RLACDRVGSG RLPEPIAILA
GLESLLWTQG QADLQGLKIL VNAGGTREFL DPVRFIGNPS SGRMGVMLAI AAQHRGAQVQ
LIHAPLTNIE PGLLTSLDRQ AVVSTEELAE AMIAAAPIAD WVLLAAAVGD VRPELRSHQK
LSKAELPASL PLQLLPDIAA QLSQQRYPNQ KLIGFAAQTG EILEPAIAKL QRKGLDAIIA
NAIDQPGQGF GSATNAAIAL RPDGSSQPLG FRSKLSLAHA ILDFVKNL