| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0289 |
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| Symbol | secA |
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| ID | 3773851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 284148 |
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| End bp | 286994 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637798695 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_399308 |
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| Protein GI | 81299100 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAATT TGCTGCTGGG CGATCCCAAC GTCCGCAAAG TCAAAAAGTA CAAACCCCTC
GTCACTGAAA TCAATCTGTT GGAAGAGGAC ATTGAGCCAC TGTCCGACAA GGATTTAATT
GCCAAAACGG CTGAGTTTCG CCAGAAGCTC GACAAGGTTT CCCACTCGCC AGCTGCAGAG
AAGGAATTGC TGGCGGAGTT GCTGCCCGAA GCCTTTGCGG TCATGCGCGA AGCCAGTAAA
CGAGTGCTGG GGCTGCGCCA CTTTGATGTG CAGATGATCG GCGGCATGAT TCTGCACGAC
GGTCAGATTG CCGAGATGAA GACGGGTGAA GGGAAAACCC TCGTCGCTAC GCTGCCGTCC
TATCTCAATG CACTGTCGGG TAAAGGTGCG CACGTCGTCA CCGTCAACGA CTACTTGGCT
CGCCGCGACG CGGAATGGAT GGGACAAGTC CACCGCTTCC TAGGCTTGAG TGTTGGCCTA
ATCCAGCAGG GAATGTCGCC GGAAGAGCGT CGCCGCAACT ACAACTGCGA CATTACCTAC
GCTACCAACA GCGAACTGGG CTTTGATTAC CTGCGCGACA ACATGGCCGC AGTGATTGAA
GAGGTAGTCC AGCGTCCCTT CAACTACGCC GTGATCGACG AGGTGGACTC GATTCTGATC
GACGAAGCCC GGACACCCTT GATCATTTCC GGTCAGGTCG ATCGCCCGAG CGAAAAATAC
ATGCGGGCAT CGGAAGTCGC GGCGCTCTTG CAGCGATCGA CGAATACGGA CAGTGAAGAA
GAGCCGGATG GCGATTACGA AGTTGACGAA AAAGGCCGTA ATGTCCTGCT GACGGATCAA
GGCTTTATCA ACGCTGAGCA ATTGTTAGGT GTCAGCGATC TGTTTGACTC CAATGACCCT
TGGGCTCACT ACATCTTTAA TGCGATTAAG GCCAAGGAGC TGTTCATTAA AGATGTGAAC
TACATCGTGC GCGGTGGCGA GATTGTCATC GTCGATGAGT TCACAGGGCG CGTGATGCCT
GGGCGTCGCT GGAGTGATGG TCTGCATCAG GCCGTGGAGT CGAAGGAAGG CGTTGAGATT
CAACCCGAAA CCCAAACCCT TGCTTCGATT ACTTACCAAA ACTTCTTCCT GCTCTACCCC
AAACTGTCGG GCATGACCGG TACGGCGAAG ACAGAAGAGT TGGAGTTTGA GAAGACTTAC
AAGCTAGAAG TAACCGTTGT TCCGACCAAC CGAGTCAGCC GTCGTCGGGA TCAGCCTGAT
GTCGTCTACA AAACTGAGAT CGGCAAGTGG CGTGCGATCG CAGCGGACTG TGCTGAACTG
CACGCGGAAG GTCGTCCTGT TCTGGTCGGT ACTACCAGTG TTGAGAAGTC GGAGTTCCTG
TCACAACTGC TGAATGAGCA GGGCATCCCC CACAACCTGC TCAACGCCAA ACCCGAAAAC
GTAGAACGCG AGGCGGAAAT CGTTGCACAG GCAGGCCGTC GGGGTGCCGT CACGATTTCG
ACCAACATGG CAGGTCGCGG GACCGACATC ATCTTGGGCG GTAATGCGGA CTACATGGCG
CGGCTGAAGC TGCGCGAGTA TTGGATGCCG CAACTGGTCA GCTTCGAAGA GGATGGCTTT
GGCATTGCTG GGGTTGCTGG TTTAGAGGGC GGTCGCCCGG CAGCGCAAGG TTTTGGGTCG
CCCAACGGCC AGAAGCCACG CAAGACTTGG AAAGCGTCGT CGGATATTTT CCCAGCAGAA
CTGAGTACTG AGGCCGAAAA GCTGCTGAAA GCAGCGGTAG ACCTCGGGGT GAAAACCTAC
GGCGGTAACA GCCTCTCGGA GCTGGTAGCG GAAGACAAGA TCGCTACGGC GGCTGAGAAG
GCGCCGACGG ATGATCCGGT GATTCAAAAA CTGCGGGAAG CCTACCAGCA AGTCCGCAAA
GAATACGAAG CAGTCACGAA GCAGGAGCAA GCCGAGGTCG TTGAACTGGG CGGCCTGCAT
GTGATTGGTA CGGAACGCCA CGAGTCACGC CGAGTGGATA ACCAGTTGCG CGGTCGTGCC
GGTCGGCAAG GGGACCCAGG ATCCACGCGT TTCTTCCTGA GCTTGGAAGA TAACCTGCTG
CGGATTTTTG GTGGCGATCG CGTGGCCAAA CTGATGAATG CCTTCCGCGT CGAAGAAGAT
ATGCCGATCG AGTCGGGCAT GCTGACGCGA TCGCTCGAGG GTGCTCAGAA GAAGGTCGAG
ACCTACTACT ACGACATCCG CAAGCAGGTG TTTGAGTACG ACGAGGTGAT GAACAACCAG
CGTCGTGCCA TCTATGCAGA ACGCCGCCGT GTTCTCGAAG GACGAGAGCT AAAAGAACAA
GTGATTCAGT ACGGCGAACG GACGATGGAT GAAATCGTCG ATGCCCACAT CAATGTGGAT
TTGCCGTCGG AAGAGTGGGA TCTGGAAAAG CTGGTCAATA AGGTCAAGCA GTTCGTCTAT
CTGCTTGAAG ACCTAGAGGC CAAGCAACTG GAAGACCTGT CTCCTGAGGC GATCAAGATC
TTCCTGCACG AGCAATTGCG GATTGCCTAC GACCTCAAAG AAGCCCAGAT CGATCAAATC
CAGCCAGGCT TGATGCGGCA GGCCGAACGC TACTTCATCC TTCAGCAGAT CGACACGCTC
TGGCGTGAGC ATTTGCAGGC GATGGAAGCC TTGCGCGAAT CCGTCGGTCT GCGGGGCTAT
GGGCAAAAAG ATCCACTGCT GGAGTATAAG AGTGAGGGCT ACGAGCTGTT CCTCGAGATG
ATGACGGCGA TTCGCCGCAA CGTGATCTAC TCGATGTTCA TGTTCGATCC GCAGCCTCAA
GCCCGTCCAC AAGCTGAGGT GGTTTAG
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| Protein sequence | MLNLLLGDPN VRKVKKYKPL VTEINLLEED IEPLSDKDLI AKTAEFRQKL DKVSHSPAAE
KELLAELLPE AFAVMREASK RVLGLRHFDV QMIGGMILHD GQIAEMKTGE GKTLVATLPS
YLNALSGKGA HVVTVNDYLA RRDAEWMGQV HRFLGLSVGL IQQGMSPEER RRNYNCDITY
ATNSELGFDY LRDNMAAVIE EVVQRPFNYA VIDEVDSILI DEARTPLIIS GQVDRPSEKY
MRASEVAALL QRSTNTDSEE EPDGDYEVDE KGRNVLLTDQ GFINAEQLLG VSDLFDSNDP
WAHYIFNAIK AKELFIKDVN YIVRGGEIVI VDEFTGRVMP GRRWSDGLHQ AVESKEGVEI
QPETQTLASI TYQNFFLLYP KLSGMTGTAK TEELEFEKTY KLEVTVVPTN RVSRRRDQPD
VVYKTEIGKW RAIAADCAEL HAEGRPVLVG TTSVEKSEFL SQLLNEQGIP HNLLNAKPEN
VEREAEIVAQ AGRRGAVTIS TNMAGRGTDI ILGGNADYMA RLKLREYWMP QLVSFEEDGF
GIAGVAGLEG GRPAAQGFGS PNGQKPRKTW KASSDIFPAE LSTEAEKLLK AAVDLGVKTY
GGNSLSELVA EDKIATAAEK APTDDPVIQK LREAYQQVRK EYEAVTKQEQ AEVVELGGLH
VIGTERHESR RVDNQLRGRA GRQGDPGSTR FFLSLEDNLL RIFGGDRVAK LMNAFRVEED
MPIESGMLTR SLEGAQKKVE TYYYDIRKQV FEYDEVMNNQ RRAIYAERRR VLEGRELKEQ
VIQYGERTMD EIVDAHINVD LPSEEWDLEK LVNKVKQFVY LLEDLEAKQL EDLSPEAIKI
FLHEQLRIAY DLKEAQIDQI QPGLMRQAER YFILQQIDTL WREHLQAMEA LRESVGLRGY
GQKDPLLEYK SEGYELFLEM MTAIRRNVIY SMFMFDPQPQ ARPQAEVV
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