Gene Synpcc7942_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0288 
SymbolglmU 
ID3773850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp282604 
End bp283962 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content55% 
IMG OID637798694 
Productbifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 
Protein accessionYP_399307 
Protein GI81299099 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCTG TTGCCATTTT GGCTGCGGGC AAAGGAACCC GGATGAAATC GCAGCTACCG 
AAGGTATTGC ACCGGCTCGG TAGTCAAACC TTGCTCGATC GCGTACTGGC AAGCCTCACC
CCTCTCAACG TCGATCGCTG CTTCGTGATC GTCGGCTATC AGGGCGATCG CGTGCGGGAA
TCATGGGCGC ACCGGACTGA CATTGAATTT GTCGAACAGA CCCAGCAACT GGGAACCGGT
CATGCGGTCC AGCAACTCTT GCCGCACCTC AAGGGTTACC AAGGCGATCT GCTGGTGCTG
AATGGTGATG TGCCGCTGCT GCGGGGCGAA ACCCTCGAGG CCTTAGTCTC AGGGCATCAA
CGCAGTGGGG CTGCAGCAAC TCTTCTAACA GCGCAACTCA ATCAACCTAA AGGCTATGGC
CGTGTCTTTT GCGATGCCAC CAGCCGGGTT TGCGAAATTA TTGAAGATCG CGACTGCACT
CCAGCTCAGC GCCAAAATCC CCGCGTCAAT GCCGGCGTCT ACTGCTTCCG CTGGCCAGAT
CTGGAAGCTG TGCTGCCAAA TCTGAGCACC GCTAACGACC AGCAAGAGTA TTACCTAACG
GAAGCAATCA CCTATCTTGA TCCGGTTTCT GCTGTTGAAG TCGCGGATAG TCAGGAGATT
TTAGGCATCA ACGATCGCCT ACAGCTAGCC GACTCCTTCC GTATCTTGCA GGAGCGAATT
CGCCAGCAAT GGATGTTGGC GGGCGTAACG CTCGTCGATC CAACCAGCAT CACGATCGAC
GAAACCGTCC AACTTGGCAC GGATGTAGTG ATTGAGCCCC AGACCCATCT GCGTGGCAAC
ACAGTGATTG GCAACAATTG CTCGATCGGC CCCAATAGTC TGATTACGAA TAGTCAGATT
GGCGACGGTG TCACGGTTCA GATGTCGGTG ATTAGCGACA GCACGATCGC AGCCAACAGC
AAAATTGGCC CCTTCGCTCA CCTGCGCGGA GCCGCCGCGA TCGGGGAAGC CTGCCGGATT
GGCAACTTTG TCGAAGTCAA GAAATCCACG GTTGGCGATC GCACCAATGT TGCGCACCTG
TCCTACTTAG GGGATGCCAC CTTAGGACAA CGAGTCAACG TCGGTGCGGG CACAATTACA
GCCAACTATG ACGGCGTTAG CAAGCATCCA ACGGTGATCG GCGATCGCAG TAAAACAGGG
GCGAATAGCG TCTTGGTTGC CCCCGTCACG ATCGGCCAAG ATGTCACGAT TGCTGCTGGT
TCAACCATCA ATAAAGATGT GCCCGATGGC GCGTTAGCGA TCGCCCGTAG TCGTCAAACC
ATTCATGAGA ATTGGTCGAC TCCTACAACA GAGCAGTGA
 
Protein sequence
MVAVAILAAG KGTRMKSQLP KVLHRLGSQT LLDRVLASLT PLNVDRCFVI VGYQGDRVRE 
SWAHRTDIEF VEQTQQLGTG HAVQQLLPHL KGYQGDLLVL NGDVPLLRGE TLEALVSGHQ
RSGAAATLLT AQLNQPKGYG RVFCDATSRV CEIIEDRDCT PAQRQNPRVN AGVYCFRWPD
LEAVLPNLST ANDQQEYYLT EAITYLDPVS AVEVADSQEI LGINDRLQLA DSFRILQERI
RQQWMLAGVT LVDPTSITID ETVQLGTDVV IEPQTHLRGN TVIGNNCSIG PNSLITNSQI
GDGVTVQMSV ISDSTIAANS KIGPFAHLRG AAAIGEACRI GNFVEVKKST VGDRTNVAHL
SYLGDATLGQ RVNVGAGTIT ANYDGVSKHP TVIGDRSKTG ANSVLVAPVT IGQDVTIAAG
STINKDVPDG ALAIARSRQT IHENWSTPTT EQ