| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0283 |
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| Symbol | |
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| ID | 3773845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 279619 |
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| End bp | 280623 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637798689 |
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| Product | dihydrouridine synthase TIM-barrel protein nifR3 |
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| Protein accession | YP_399302 |
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| Protein GI | 81299094 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGAAT TTGCCGTCGT TGACCGAGCG ATTCCTGCTC ATTTACAAAC GCCACTGCAG
GTAGGTTCTC TGATTCTGCA CAGTCGTGTC TTGCAATCAC CGCTGGCGGG CGTCAGCGAT
CGCAGCTTTC GACAGCTCGT CCGGCGATCG GCTCCGCAGT CGCTGATTTT TGCCGAAATG
GCGCATGCAG GCTTGCAATT AGCAGGGCGC GATCGTTGGG AATTTTTGCC CCATGAGCAA
CCGATTGGCG CGCAGTTATT TGGTGATCAG CCAGCGACTT TAGCAGCAGC AGCGCAACAA
GCCGAAGCAG CTGGAGCGGT TTGTATCGAC CTGAACATGG GTTGTCCCGT CAGTAAAGTG
ACGCGCAAAC GCGGTGGATC CGCGCTCCTC CGCGAGCCAG AACTGGCGAT CGCGATCGTC
CAAGCGGTGG CAGCAGCGGT CAGCATTCCC GTCACCGTCA AAACCCGCTT GGGCTGGGAG
CAGGTGACCA TTCTCGACTT CGCCCAACAG CTTGAAGCAG CAGGGGCACA ACTGCTGACA
CTTCATGGCC GCAGTCGCAG TCAGGGCTAT AGCGGTCAGG CAGATTGGAA CTGGATTACA
CGGGTCAAAT CACGGCTGTC GATTCCCGTA ATCGCCAATG GTGATATCAA CTCGCCAGCA
GATGCGATCG CCTGTCTCCA GCAAACGGGT GCGGATGGTG TGATGTGTGG GCGCGGTAGC
CTCGGTAATC CTGGCTTAGT GGGCGCGATC GATCGCTCTC TCAAAACTGG AGAGCAAACA
CCGGAATTAG AGCTGCGCGA TCGCCTGCAA CTGGCGCGGG AACATCTGCT GCTGCTCTGG
GAGGACAAAG GAGCAGCGGG ACTCTTGCAA GCTCGCAAGC ATTTGGGCTG GTATCTCGCG
GATCAACCTG ACTATCAAGA CCTGCGTCAG CACCTCCTCC GCAGTGAGGA TCTCAGCCAA
AGTCTGGATT TATTGGATGC AGCAATCGCC TCTGTAGTCT GCTGA
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| Protein sequence | MAEFAVVDRA IPAHLQTPLQ VGSLILHSRV LQSPLAGVSD RSFRQLVRRS APQSLIFAEM
AHAGLQLAGR DRWEFLPHEQ PIGAQLFGDQ PATLAAAAQQ AEAAGAVCID LNMGCPVSKV
TRKRGGSALL REPELAIAIV QAVAAAVSIP VTVKTRLGWE QVTILDFAQQ LEAAGAQLLT
LHGRSRSQGY SGQADWNWIT RVKSRLSIPV IANGDINSPA DAIACLQQTG ADGVMCGRGS
LGNPGLVGAI DRSLKTGEQT PELELRDRLQ LAREHLLLLW EDKGAAGLLQ ARKHLGWYLA
DQPDYQDLRQ HLLRSEDLSQ SLDLLDAAIA SVVC
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