Gene Synpcc7942_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0278 
Symbol 
ID3773840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp273657 
End bp274154 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content57% 
IMG OID637798684 
Productbidirectional hydrogenase complex protein HoxE 
Protein accessionYP_399297 
Protein GI81299089 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTT CTGAAACGAC ACCCAGTGTC GATCCTCGTC GTCGTCGCCT AGAGCTAGCT 
ATCAAGCGGC AAGCGGCCCA AGCAGATGCC CTGATTGAAA TTCTGCATGA AGCCCAGTCG
CTCTACGGTT ATCTCGATCG CGAGCTCCTG CAATGGGTAG CTGAGCAACT CGCCTTACCC
CGCAGCAAGG TCTACGGCGT GGCTAGCTTC TATCACCTGT TCCAGCTCAA TCCTTCCGGT
CGCCACCGCT GCCATGTCTG CCTAGGCACG GCCTGCTATG TCAAAGGGTC GCAAGCCATT
CTCGACTGCC TAATAGCGGA GCTAGGCATT CGCGAAGGCG AAACCACCAA TGATGGATCG
GTTTCCCTCG GAACCGTGCG CTGTGTGGGT GCCTGCGGAA TTGCCCCCGT CGTGGTCTAT
GACGGTGATA TTCAAGGCCG CCAAGAATCT GAAGCGGTCT GGCAACAAGT CCAAGCTTGG
CAGCAGGAGG CGCACTGA
 
Protein sequence
MATSETTPSV DPRRRRLELA IKRQAAQADA LIEILHEAQS LYGYLDRELL QWVAEQLALP 
RSKVYGVASF YHLFQLNPSG RHRCHVCLGT ACYVKGSQAI LDCLIAELGI REGETTNDGS
VSLGTVRCVG ACGIAPVVVY DGDIQGRQES EAVWQQVQAW QQEAH