Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0264 |
Symbol | |
ID | 3773826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 261617 |
End bp | 262372 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637798670 |
Product | undecaprenyl pyrophosphate synthase |
Protein accession | YP_399283 |
Protein GI | 81299075 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTG TCTCTAATTG CGATTTACGT CAGCGCCCGC CCGACCTACT CCCCGATCGC CTGCCTAGCC ACGTCGCGGT GATTATGGAC GGCAATGGTC GTTGGGCCAA GCAGCGTGGC TTGCCACGAA TTATGGGTCA CCGGCGCGGG GTTGACTCCC TCAAGCAGCT GTTGCGCTGT TGCGATGACT GGGGTATTGG CGCCCTGACT GCCTACGCAT TCTCAACAGA AAACTGGGGT AGACCTCACG AAGAGGTTGA CTTTCTCATG ACTCTGTTTG AGCGGGTCTT GCGCCGCGAA CTTCAAGAGT TAATGGCTGA AAACGTTCGC ATTCGGTTTG TCGGTGACCT CGAGAATCTA CCGACATCGC TGCAACGAGA AATCGATCGC GCGACCTCAG CGACAGCCCA AAATGACGGA ATTCGCTTCA CGGTCGCGAC AAACTACGGC GGCCGTCAAG AACTCCTCAA AGCCTGTCGT GAGATTGCGG CCCAAGTGCA GCAAGGCCAG TTGGCGATCG ATGCCATTGA CGAGTCGCTC CTCTCCAGTC ATCTCTACAC TGCCGGCGTC ACCGATCCCG ATCTCCTGAT TCGAACCAGT GGCGAAAAAC GGCTGAGCAA TTTCTTGCTC TGGCAACTGG CCTATGCCGA AATCTACGTG ACCGATACAC TCTGGCCTGA TTTCGATCGC TACGAGTTTT ACCTAGCCCT GCGCGATTTC CAAAGTCGCC AACGCCGCTT TGGTCGCTTG ACCTAG
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Protein sequence | MTSVSNCDLR QRPPDLLPDR LPSHVAVIMD GNGRWAKQRG LPRIMGHRRG VDSLKQLLRC CDDWGIGALT AYAFSTENWG RPHEEVDFLM TLFERVLRRE LQELMAENVR IRFVGDLENL PTSLQREIDR ATSATAQNDG IRFTVATNYG GRQELLKACR EIAAQVQQGQ LAIDAIDESL LSSHLYTAGV TDPDLLIRTS GEKRLSNFLL WQLAYAEIYV TDTLWPDFDR YEFYLALRDF QSRQRRFGRL T
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