Gene Synpcc7942_0264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0264 
Symbol 
ID3773826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp261617 
End bp262372 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content56% 
IMG OID637798670 
Productundecaprenyl pyrophosphate synthase 
Protein accessionYP_399283 
Protein GI81299075 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTG TCTCTAATTG CGATTTACGT CAGCGCCCGC CCGACCTACT CCCCGATCGC 
CTGCCTAGCC ACGTCGCGGT GATTATGGAC GGCAATGGTC GTTGGGCCAA GCAGCGTGGC
TTGCCACGAA TTATGGGTCA CCGGCGCGGG GTTGACTCCC TCAAGCAGCT GTTGCGCTGT
TGCGATGACT GGGGTATTGG CGCCCTGACT GCCTACGCAT TCTCAACAGA AAACTGGGGT
AGACCTCACG AAGAGGTTGA CTTTCTCATG ACTCTGTTTG AGCGGGTCTT GCGCCGCGAA
CTTCAAGAGT TAATGGCTGA AAACGTTCGC ATTCGGTTTG TCGGTGACCT CGAGAATCTA
CCGACATCGC TGCAACGAGA AATCGATCGC GCGACCTCAG CGACAGCCCA AAATGACGGA
ATTCGCTTCA CGGTCGCGAC AAACTACGGC GGCCGTCAAG AACTCCTCAA AGCCTGTCGT
GAGATTGCGG CCCAAGTGCA GCAAGGCCAG TTGGCGATCG ATGCCATTGA CGAGTCGCTC
CTCTCCAGTC ATCTCTACAC TGCCGGCGTC ACCGATCCCG ATCTCCTGAT TCGAACCAGT
GGCGAAAAAC GGCTGAGCAA TTTCTTGCTC TGGCAACTGG CCTATGCCGA AATCTACGTG
ACCGATACAC TCTGGCCTGA TTTCGATCGC TACGAGTTTT ACCTAGCCCT GCGCGATTTC
CAAAGTCGCC AACGCCGCTT TGGTCGCTTG ACCTAG
 
Protein sequence
MTSVSNCDLR QRPPDLLPDR LPSHVAVIMD GNGRWAKQRG LPRIMGHRRG VDSLKQLLRC 
CDDWGIGALT AYAFSTENWG RPHEEVDFLM TLFERVLRRE LQELMAENVR IRFVGDLENL
PTSLQREIDR ATSATAQNDG IRFTVATNYG GRQELLKACR EIAAQVQQGQ LAIDAIDESL
LSSHLYTAGV TDPDLLIRTS GEKRLSNFLL WQLAYAEIYV TDTLWPDFDR YEFYLALRDF
QSRQRRFGRL T