Gene Synpcc7942_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0258 
Symbol 
ID3773820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp254894 
End bp255334 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content52% 
IMG OID637798664 
Producthypothetical protein 
Protein accessionYP_399277 
Protein GI81299069 
COG category[R] General function prediction only 
COG ID[COG3565] Predicted dioxygenase of extradiol dioxygenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCTG CCGCTCTTTT TCACTTGGCA TTTCCGGTCA GTGATCTTGC CCTGACTAAG 
CAATTTTATG TGCAGGGTTT GGGCTGTCGT GCCGGACGAG AGTCGCCGAC CTCGCTCATT
TTGGATCTAG CAGGCCACCA AATTGTCGCT CACCTGAGCC GATCGCCCCT GACGCCACAG
AATGGCATTT ATCCGCGTCA CTTTGGGCTG GTTTTTACTG ATGAAGTGGA TTGGGATGCC
TTGCTCGATC GCGCCCAGCA GCAGAATCTC AGCTTTTATC AACCGGCACG GTTGCGCTTC
CCTGACAGCT TGTTAGAACA CCGGACTTTT TTCCTTGAAG ATCCCTTCCA CAACTTGCTG
GAATTTAAGT TCTATCGGCA CCCGGAGGCA ATTTTTGGCG CTCAAGACTT TGCCCTAGTT
GGGGATTCCA CTGGCGCTTA G
 
Protein sequence
MMAAALFHLA FPVSDLALTK QFYVQGLGCR AGRESPTSLI LDLAGHQIVA HLSRSPLTPQ 
NGIYPRHFGL VFTDEVDWDA LLDRAQQQNL SFYQPARLRF PDSLLEHRTF FLEDPFHNLL
EFKFYRHPEA IFGAQDFALV GDSTGA