Gene Synpcc7942_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0249 
Symbol 
ID3773812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp245851 
End bp246636 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content60% 
IMG OID637798655 
ProductATPase 
Protein accessionYP_399268 
Protein GI81299060 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCCT TAGGACGGCA ACCCGAACCT GTGACTGCGA TCGCTTCAGC CCCAGAGACC 
ATGATTTATG CCGAGGGGGT CGAAAAATGG TACGGCAACC AATTTCAAGC TCTGTGCGGC
GTTAGCCTCA CGGTTCAGCG GGGCGAGGTG GTTGTGATGA TGGGGCCATC AGGGTCTGGT
AAATCGACCT TTTTGCGCAC CCTCAATGCC CTTGAGTCGC ACCAGCGTGG CGAGATTTGG
ATTGAGGGAC ATCGTCTCAG CCACGATCGC CGTGACATTG CCACCATCCG CCAAGAGGTC
GGCATGGTGT TTCAGCAGTT CAACCTCTTC CCCCATTTGA CGGTGCTCCA GAACTTGATG
CTGGCGCCGG TGCAAGTGCG CCGTTGGCCC GTCGCTCAAG CGGAAGCGAC TGCCCGCCAA
CTCTTGGAAC GGGTGCGCAT TGCTGAGCAG GCCGATAAAT ATCCGGGGCA GCTATCCGGC
GGCCAACAAC AGCGGGTCGC GATCGCACGG GCCTTGGCAA TGCAGCCGCG CATCCTCCTA
TTTGACGAAC CCACGTCTGC CCTCGATCCA GAGATGGTGC GCGAAGTCCT GGACGTGATG
CGGGATCTCG CCAGCGAAGG CATGACGATG CTGGTGGCGA CCCATGAAGT CGGCTTTGCC
CGCGAAGTTG CTGATCGCGT CGTCCTAATG GCCGATGGGC AAATTGTCGA GGAAGCCCCG
CCCGATCGCT TCTTCACAGC ACCCCAGAGC GATCGGGCCA AGCAGTTTCT GGCGCAGATC
CTCTAA
 
Protein sequence
MTPLGRQPEP VTAIASAPET MIYAEGVEKW YGNQFQALCG VSLTVQRGEV VVMMGPSGSG 
KSTFLRTLNA LESHQRGEIW IEGHRLSHDR RDIATIRQEV GMVFQQFNLF PHLTVLQNLM
LAPVQVRRWP VAQAEATARQ LLERVRIAEQ ADKYPGQLSG GQQQRVAIAR ALAMQPRILL
FDEPTSALDP EMVREVLDVM RDLASEGMTM LVATHEVGFA REVADRVVLM ADGQIVEEAP
PDRFFTAPQS DRAKQFLAQI L