| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0248 |
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| Symbol | |
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| ID | 3773811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 244642 |
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| End bp | 245832 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637798654 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_399267 |
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| Protein GI | 81299059 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGAT CGCCCCAGGG GATCACGCCT CAACAAACCC CGATCGCCTG GCTCCGACAA
AACCTGTTTA GCTCCTGGCT GAACAGTGCC ATCACGCTCC TCTTGGTGGT GATTATTGTC
ACGGTTGTGG GGCGGCTAGG GCTTTGGATC ACGACAGAAG CCCGATGGAC GGTACTGGTC
GATAACTGGA CGCTCTTTTT TGTAGGTCGC TATCCCGCCG CAGAACAGTG GCGCCTTTGG
CTTTGGCTGG GGCTACTCAG TCCGACCTTA GGATTGACCT GGGGCTGTCT GGCGACGGGC
TCTCATCGTT GGCAACGGCG ATCGCTCTGG GGCTGGGCCG GTCTGGCTGC CGCGATCGCC
GGGATTCCTT TGCCTTGGTT CCCGCACAAG CTGGGATTAG CTGCGATCGC AGCCACTGTG
CCAGCGGCCA GTTGGCTGGC TCAACGCTGT CGGGGACAAG CTTGGTTGCG CTTTCTGCCG
ACGCTCTGGG GAGTTCTCTT CCTGGTAGGA CTTTGGCTGC TCCAAGGGGG ACTCGGTCTG
CGACCAGTCT CAAGTAATGA CTGGAGCGGT TTGCTGCTGA CCTTAGCGAC CGCTTTGATC
AGCATGGTCT GCTCATTGCC GCTGGGCATC TTGCTGGCCT TGGGGCGTCA GAGTTCGCTA
CCCGCCATTC GCTGGCTCTC AGTCACTTAT ATTGAGCTGT TCCGAGGCCT GCCGCTAGTC
ACCATCCTTT TCTTCGGGCA GGTAATGGTG CCACTGATGT TGGATTCTGA ATGGCGGATC
GATCGCATTC TGCGGGCGAT CGTGGGGCTG ACGATTTTCC TGTCTGCCTA CTTAGCTGAA
ACCGTGCGGG GAGGCTTGCA AGCGATTCCC CAAGGTCAGT TTGAAGCGGC TGCGGCCTTG
GGTCTAAATC TGTTTCAGAC CTATCGATTT ATCGTTCTGC CCCAAGCCCT GCGGATCTCG
ATTCCCGCGA TCGTGGGCCT CTTCCTCAAC CTGTTGCAAG ACACCACCTT GCTGTCGATT
GTCGGCCTCC TGGAATTGCT GGGCATCAGT CGCTCAATTT TGGCCAATCC GGCCTATCTC
GGTCGCTATG CCGAGGTCTA TCTGTTCTTG GGTGTGCTTT ACTGGCTGTG CTGCTATGGC
CTCGCCCAAC TCAGCCGCCG CTTGGAACAA CGGCTAACCC CCCAGCGCTA G
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| Protein sequence | MMRSPQGITP QQTPIAWLRQ NLFSSWLNSA ITLLLVVIIV TVVGRLGLWI TTEARWTVLV
DNWTLFFVGR YPAAEQWRLW LWLGLLSPTL GLTWGCLATG SHRWQRRSLW GWAGLAAAIA
GIPLPWFPHK LGLAAIAATV PAASWLAQRC RGQAWLRFLP TLWGVLFLVG LWLLQGGLGL
RPVSSNDWSG LLLTLATALI SMVCSLPLGI LLALGRQSSL PAIRWLSVTY IELFRGLPLV
TILFFGQVMV PLMLDSEWRI DRILRAIVGL TIFLSAYLAE TVRGGLQAIP QGQFEAAAAL
GLNLFQTYRF IVLPQALRIS IPAIVGLFLN LLQDTTLLSI VGLLELLGIS RSILANPAYL
GRYAEVYLFL GVLYWLCCYG LAQLSRRLEQ RLTPQR
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