Gene Synpcc7942_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0239 
Symbol 
ID3773802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp234331 
End bp234669 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content57% 
IMG OID637798645 
Productcytochrome C6 soluble cytochrome f 
Protein accessionYP_399258 
Protein GI81299050 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.783441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAAGAT GGCTTGTCCT AGGCTTGCTG GTGATTGGCC TCAGTGTAGT GAATCCGGCG 
CGGGCGATCG CGGCAGATCT GCAAGTTGGG GCTAGGCTGT TCCAAAGCAA CTGCACCACC
TGCCATTTGA ATGGTGGCAA CGTTATCAAT GGTCAGAAAA CCCTGCGGCA AGAAGCCCTA
CGCCGCTATG GTATGGATTC TGTCGCTGCG ATTCAGAAGC AAGTGACCTA TGGCAAAAAT
GCCATGCCAG CCTTTGGGCA ACGCCTCAGC CCTGAGCAAA TTGAGGCTGT GGCCACCTAC
GTCTTCGATC GTGCGGAGCG GGGCTGGACC GCACTCTAG
 
Protein sequence
MGRWLVLGLL VIGLSVVNPA RAIAADLQVG ARLFQSNCTT CHLNGGNVIN GQKTLRQEAL 
RRYGMDSVAA IQKQVTYGKN AMPAFGQRLS PEQIEAVATY VFDRAERGWT AL