| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0202 |
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| Symbol | |
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| ID | 3775810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 202638 |
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| End bp | 204089 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637798608 |
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| Product | Cbb3-type cytochrome oxidase subunit 1-like |
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| Protein accession | YP_399221 |
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| Protein GI | 81299013 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.529083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATCG CGAGCCCAGC CGGGTTTCGT CGCTTGCCTC CTTGGCTAGC ACGACTGGCG
GGCAGTTCAA CGCTGAGTGA ATCTCAACCT GATCATGCAG CTTGGGTCTG GCTGGGGGGC
GCACTTGTCT GGATGATTCT GGGCATGTGC CTTGGCATGA TCGCAGCGAT CAAGCTGACC
TACCCCGATT TCTTGGGGGG TGCAGCTCCC CTCGGCTTTG GTCGAGTGCG CCCCGAACAT
GTCAACACCA TTCTGTTTGG CTGGATTGTT GGTGGCGAAA TTGGCGCAGC GCTCTACATC
GTGCCGCGCG TCTGCCAGCG ATCGCTCATC TTGGGTGAAC TGGGTGCCCT GAGTGGCTGG
GCCTATCACA TCGCCGTTTT GCTGGGGCTC GTCAGCGTTA GCCTAGGCTG GACCAAAGGC
GCAGAGTACG AGGAATGGGT GCGTGGCATC AACCTAGCGG TGGTGATCAC GGTGAATCTC
ACAGCGCTCT GTTTGGTGCT CACGGCTTTC GAGCGGCGGG TTAGCGGCCT GTTTGTCAGC
GTCTGGTACT TCTTTCTATT CGCGATCGCC TTTGACTTCA TCTATATTCC CGCCAACCTC
AGTCGTAATG CCGGGGCCGA AGGCGCGGTC ATCAACTGGT ACTACGGCCA CAATGCAGTC
GGCTCCGTTA TGACCGGAGC GGGCTTGGCG ATCGCCTATT ACGTTGTGCC ACGGCTGCTG
AATCGCCAAC TGTTTGCCCA CGGCATCGCT ACCTTGAGCT TCTGGACCTT TGCCGGCTTC
TACATCTGGA ACGGCGGCCA CCACTTACTT TATGGTCCGG TACCGCGCTT CATCACGATG
ATGGGCTATT TCGCAGCCTT TGGTATGACA CTGCCCTTTG TCCTGTCGAC GGTGTCGCTC
TGGGGCACTA TTTGGGGCCA GTGGCGCGCC ATTTTGGACA GCATTGCCGT GCGCTTCGCG
GTTCTTGCTG GCTTTGTCTA CTTCTGGGCT TCAGCCTCGG GAGCCATGCT GGCTTGGCAC
GAACTCACCG TGATTCAGCA TTTCTCTGAC AACACGATCG CCCACGTTCA CCTCGCCTTC
CTCGGCTTCA CGACACCAGC CCTGAATGCC CTGCTCTATC TGATGGTGGA ACGGGGGATG
CGCCGGCCAC TGATCCCCGT CCTGCAGAAA TTGCACTGGT GGATGTTTGT GATTGGCTGC
GCGCTCTACA TCCTGCCGAT CTACGGGGCC GCCTTTTTTG AAGGGGTGGG CTGGTTCCAG
CAAGTGCCCT TTAGTGAAAC CGTTGCCCTG CGCTACCCCT ACTACTACCT GCGGATGTAC
AGCGGTCTTT TCCTAATTGG CGGGCAGTTG GCGATGGTTT GGAACCTGAT CTATGCCTGG
CGATCGCCTG CATTAGAGGC AGTACCGGCA ATCGACTCCC CAGTCTGGCT GGTTCCAGGA
GAAGAAGCAT GA
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| Protein sequence | MTIASPAGFR RLPPWLARLA GSSTLSESQP DHAAWVWLGG ALVWMILGMC LGMIAAIKLT
YPDFLGGAAP LGFGRVRPEH VNTILFGWIV GGEIGAALYI VPRVCQRSLI LGELGALSGW
AYHIAVLLGL VSVSLGWTKG AEYEEWVRGI NLAVVITVNL TALCLVLTAF ERRVSGLFVS
VWYFFLFAIA FDFIYIPANL SRNAGAEGAV INWYYGHNAV GSVMTGAGLA IAYYVVPRLL
NRQLFAHGIA TLSFWTFAGF YIWNGGHHLL YGPVPRFITM MGYFAAFGMT LPFVLSTVSL
WGTIWGQWRA ILDSIAVRFA VLAGFVYFWA SASGAMLAWH ELTVIQHFSD NTIAHVHLAF
LGFTTPALNA LLYLMVERGM RRPLIPVLQK LHWWMFVIGC ALYILPIYGA AFFEGVGWFQ
QVPFSETVAL RYPYYYLRMY SGLFLIGGQL AMVWNLIYAW RSPALEAVPA IDSPVWLVPG
EEA
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