Gene Synpcc7942_0191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0191 
Symbol 
ID3775799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp190472 
End bp191620 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content59% 
IMG OID637798597 
ProductSerine--glyoxylate transaminase 
Protein accessionYP_399210 
Protein GI81299002 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.746637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA AATTGATGCT GATGATCCCC GGCCCGACGC CGGTGCCGGA GCAGGTCTTG 
CTAGCGATGG CCAAGCATCC GATTGGGCAC CGCAGCGCTG ACTTTAGCCG CTTGGTCGCT
GACACCACCG CCGGTCTGAA GTGGTTGCAC CAAACGACGG GTAATGTCTT GGTGCTTTGC
AGCAGCGGTA CGGGTGCCAT GGAAGCGGGC ATCATCAACT TCCTCAGTGC AGGCGATCGC
GTTCTCTGCT GCGAAAACGG TAAGTTCGGC GAGCGTTGGG TCAAGCTGGC GCAAGCTTTT
GGGCTGGATG TTGACCTCGT GCAAGCGCCT TGGGGCAAAC CGCTCGATCC GGAAGCGATT
CGCGCCAAGT TGGAAGCGGA CACCGATAAG CAAATCAAAG CGGTCATCCT CACCCACAGT
GAAACCTCGA CGGGGGTGAT CAACGACCTC GAAACGATCA GCGGTTACAT TCGCGCCCAT
GGTGCGCTGA GCATTGTTGA TGCAGTCACC AGCTTGGGTG CGGCCAATGT GCCGATCGAT
GCTTGGGGCT TGGATGTTGT CGCCTCGGGT TCGCAAAAAG GCTACATGAT TCCGCCCGGA
CTGGGTTTTG TAGCGGTCAG CGATCGCGCT TGGAAAGCCT ACGAAACGGC GACGTTGCCC
AAGTTCTACC TCGACCTTGG CAAGTACCGC AAAGCGGCCC AGAAGGATTC CAATCCCTTC
ACACCGCCAG TCAACCTCTA CTACGCCCTC GATGCTGCCC TGAAAATCAT GCAGCGCGAA
GGTCTGGAAA ATATCTTTGC GCGCCATGCG AAACTGACCC GCGCCACCCG CGCTGCGATC
AAGGCGCTCA ACCTGCCGCT CTACGCCGCT GATGAAGTGG GTAGCCCGGC AATTACAGCA
GTCGCGCCGG TGGAAGTTGC CGCTGAAGAC ATCCGCAGCT TCACCAAAAA GCACTTCGAT
ATTCTGCTGG CGGGCGGTCA AGACGACCTG AAGGGCAAAA TCTTCCGGAT TGGCCACTTG
GGCTTTGTCT CGGGTCGCGA TGTGTTGACC GCGATCGCCG CGATCGAAGC GGCTCTGACT
GGCTTGGGCT ACAGCAACTT CACCTCGGGT GCAGGGGTTG CCGCAGCGGC AGCTGAACTC
GCGAAGTAG
 
Protein sequence
MEDKLMLMIP GPTPVPEQVL LAMAKHPIGH RSADFSRLVA DTTAGLKWLH QTTGNVLVLC 
SSGTGAMEAG IINFLSAGDR VLCCENGKFG ERWVKLAQAF GLDVDLVQAP WGKPLDPEAI
RAKLEADTDK QIKAVILTHS ETSTGVINDL ETISGYIRAH GALSIVDAVT SLGAANVPID
AWGLDVVASG SQKGYMIPPG LGFVAVSDRA WKAYETATLP KFYLDLGKYR KAAQKDSNPF
TPPVNLYYAL DAALKIMQRE GLENIFARHA KLTRATRAAI KALNLPLYAA DEVGSPAITA
VAPVEVAAED IRSFTKKHFD ILLAGGQDDL KGKIFRIGHL GFVSGRDVLT AIAAIEAALT
GLGYSNFTSG AGVAAAAAEL AK