Gene Synpcc7942_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0189 
SymbolguaA 
ID3775797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp187531 
End bp189258 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content56% 
IMG OID637798595 
ProductGMP synthase 
Protein accessionYP_399208 
Protein GI81299000 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGGGAAT CTTCAGCCCG GAAACCGAAT ATCAGCGTCA GCGGACGATG GCTTGTTCAC 
CCCGCGATCG CGGCCTTCAG TTCTGCGTTT CCCGGTTGTT TTTGCCCCTT GCCGAGCCCT
GCCGTGACGC TCCAGACTGA AATGGAGGCT GCACTTGAAG TTGCAGCCTT GAACCGTGAA
ATGTTGATCA TTCTGGACTT CGGGTCGCAG TACTCGGAGC TGATTGCTCG CCGCATTCGC
GAAACGCAAG TTTATTCAGA AGTGCTGTCC TACCGCACCA CGGCGGATCA AATTCGGCAG
CTGTCTCCCA AGGGCATCAT CCTTTCAGGC GGCCCTAATT CGGTCTACGA CGACTACGCG
CCAGTTTGCG ATCCAGAAAT CTGGAATCTG GGAATTCCGG TGCTGGGCGT CTGCTACGGC
ATGCAGCTGA TGGTGCAACA GCTAGGGGGC CAAGTCGATC GCGCCGAGCG TGGCGAATAT
GGCAAGGCAG CGTTGGTCAT CGACGATCCG ACCGATTTGC TGACCAACGT CGAACCGGGC
TCGACCATGT GGATGAGCCA TGGCGACTCT GTCAAAACCA TGCCCGAGGG CTTTGAGCTG
CTCGCCCACA CCGATAACAC CCCCTGCGCT GCGATCGCGG ATCACCAGCG CAAGTTCTAC
GGCGTGCAGT TCCACCCGGA AGTCGTGCAT TCCGTGCATG GCATGGCGCT GATTCGCAAC
TTTGTCTATC ACATTTGCGA TTGCGAACCG ACTTGGACAA CGGAAACCTT TGTCGAAGAA
GCGATTCGCG AAATTCGGGC ACGAGTCGGT GATAAGCGCG TTCTCCTAGC GCTATCCGGC
GGTGTAGATT CTTCGACGCT GGCCTTCCTG TTACATCGGG CAATCGGCGA TCAGCTGACC
TGTATGTTCA TTGATCAGGG CTTCATGCGC AAAGGCGAAC CGGAGCGCTT GATGGAGGTA
TTCAACGAGA AATTCAAGAT TCATGTTGAA TATATTCAAG CTCGCGATCG CTTCTTACAG
CGACTGGAAG GCATCACCGA TCCCGAAGAA AAACGCAAAC GGATTGGCCA CGAATTCATT
CGCGTTTTTG AAGAAGAATC GCGTCGGCTC GGCCCCTTCG ACTATCTGGC CCAAGGCACG
CTCTATCCCG ATGTGATTGA GTCGGCAGAC ACTAACGTCG ATCCCAAAAC GGGCGAGCGA
GTGGCGGTCA AGATCAAGAG CCACCACAAC GTCGGTGGTC TGCCCAAAGA CCTCCAGTTC
AAGCTAGTTG AACCGCTGCG GCGTCTGTTC AAAGATGAAG TGCGTCAGGT TGGGCGATCG
CTGGGTCTAC CAGAAGAAAT CGTCAAGCGC CATCCGTTCC CAGGCCCGGG CCTCGCGATT
CGGATTCTGG GTGAAGTCAC AGCTGAAAAG CTCAACATCC TGCGCGATGC AGACTTGATT
GTTCGCCAGG AAGTCAACCG TCAGGGCTAT TACGACGAGT TCTGGCAAGC CTTCGCTGTG
CTGCTGCCGG TCAAGAGTGT CGGTGTGATG GGCGACAAGC GCACCTACGC CTACCCTGTT
GTGCTGCGTT TTGTCAGCAG TGAAGACGGC ATGACCGCTG ACTGGTCGCG GGCTCCCTAC
GACCTACTGG AGACGATTTC GAATCGGATT GTCAACGAAG TGAAAGGCGT CAACCGCGTC
GTCTACGACA TCACCTCGAA ACCCCCTGGC ACGATCGAGT GGGAATGA
 
Protein sequence
MGESSARKPN ISVSGRWLVH PAIAAFSSAF PGCFCPLPSP AVTLQTEMEA ALEVAALNRE 
MLIILDFGSQ YSELIARRIR ETQVYSEVLS YRTTADQIRQ LSPKGIILSG GPNSVYDDYA
PVCDPEIWNL GIPVLGVCYG MQLMVQQLGG QVDRAERGEY GKAALVIDDP TDLLTNVEPG
STMWMSHGDS VKTMPEGFEL LAHTDNTPCA AIADHQRKFY GVQFHPEVVH SVHGMALIRN
FVYHICDCEP TWTTETFVEE AIREIRARVG DKRVLLALSG GVDSSTLAFL LHRAIGDQLT
CMFIDQGFMR KGEPERLMEV FNEKFKIHVE YIQARDRFLQ RLEGITDPEE KRKRIGHEFI
RVFEEESRRL GPFDYLAQGT LYPDVIESAD TNVDPKTGER VAVKIKSHHN VGGLPKDLQF
KLVEPLRRLF KDEVRQVGRS LGLPEEIVKR HPFPGPGLAI RILGEVTAEK LNILRDADLI
VRQEVNRQGY YDEFWQAFAV LLPVKSVGVM GDKRTYAYPV VLRFVSSEDG MTADWSRAPY
DLLETISNRI VNEVKGVNRV VYDITSKPPG TIEWE