| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0188 |
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| Symbol | |
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| ID | 3775796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 185682 |
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| End bp | 187418 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637798594 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_399207 |
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| Protein GI | 81298999 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCC GTCCTATGGT GCCAACCGCG GATCAACTTG CCACAGATGA CTTGAGTCTG
TCGGATCGAT CGCGATTTTG GCTGGCGGCT CTTGAAGCAT CGGGACAGGG TGTGGCGATC
GCAGATGCTA CGCATCCTGA TTTGATCCTG ACCTACGTCA ATTCGGCCTT TAAAAAGCTA
ACTGGCTACA ACGCCGCCGA AGCGCTCGGT AAAAGTTGTC GTTTTCTGCA GGGAAGCGAT
CGCGCCCAGC CTGGTATTAC CACGCTCCGG CAAGCCATTC GCAACGGTCA AGCCTGCGAA
GTTGTTCTGC GTAACTACCG CAAAGATGGC TCGTTGTTTT GGAATCAGCT GACGATCGCA
CCGATTACGG ACGGTCAAGG CAAGGTCTCG CACTACGTCG CGTTGCAACG CGATATCACG
GCCTTTAAAG AGCAGGAACA GGCGCTGCAG CGCCAGGGCA TTTACGACGA GCATTCGGGT
CTACCCAAAC GTCAGCTTTT CCTCGATCGC TTGAATCAAG CGCTGGCTTG GAGTCAATTT
AGCGGCGTAC CGGGTGCCTT GCTGTTGATT GATTTAGGTC TGCCAGCACA CCTCGATGGC
AGCCCGAGCC TCAGCCCTGA TGCTGAGGAA AACCTTGAAA TCATTGCCAA TCGGCTTCAG
GCCTACGTTC GTCCCCACGA AACCCTAGCG CACCTCAACC ACCATCAATT TGGGTTGCTG
CTGCTCGATC CCGATGTGCA ACTCCGAGCA GAAGAGCGAG CTCACGGCAT TCAAACCTTG
ATTCGCGATC GTTTGGCTGG GTTTGAGGGC GGTGCTCATA TCGGCATCGT CCCCCTGACC
CCAGAGACTC CTGCTACGGT CTTGCTCCAA GCGGCGGAAG CCGCTGCCAT GACAGCGCGA
TCGCAGCAAC AAGGTCACCT CAGTCTCGAA GCGAGTGCCA TTGTGGCAGC TCCAGAGCAG
TATTCCCGCG ATCGCGATTG GCAACAGGCG ATCGCAGCAG GTGAACTGAC ACTCGCTCTG
CAACCTCAAA TGGGCCTGCG CAACCGCCAA TTGCGGGGAT TTGAAGTTCA GCTACGCTGG
CAGCATCCCC AACAAGGCAC CTTGCTGGCC TCGCAACTGA TGGAGCATTT AGAACAGTCC
CAGCACCGAG AAACGGTGGG GCGCTGGTTC CTCGATCAAG CGGGTCAATT GCTTAGCCAA
TGGCGAAACA GTGCCCAATT TAGTGGTCTG TTTGCTCTAT CGCTGTTGCC GCAACAGTGG
AAGTCACCCA GCTTTATCCA TGACTTGCGC AGCTTGCTGG AAACCTACCA GATCCCGCCC
GAGCAGCTAG AGCTCGATCT GCCTGCTCAG AGCTTAGCGG AGTCTGCCGC CGAGTCTTGG
GATTGGGTCT ATGCGGTGCG CGATTTAGGC ATTGGCATTG GCCTCGCTGA TTTCGGTAGC
CGCTCGATTG GTCTGTATGA CCTGCGTAAC TTGCCTCTAA CGACCCTCAA ACTGGAACGC
CGGTTTGTGC GCGGGCTCCC TGATGATGCC AACGATCGCG CGATCGTGCG GGGGGTCGTA
GCTATGTCGC AAGCCCTCAA GGTGCGGATT GTGGCGCGGG GCGTTGATAC GGTTGACCAA
GCCAAGTTCT TGGCACGGGC CGAATGTGAC GCCATGCAAG GGTTGGCCTA CTCCGCACCG
TTGACCATTG AAGAAGCGCT GCAAGTGGCG CGATCGCCCC AAGCTCCCGC TTGGTAG
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| Protein sequence | MIARPMVPTA DQLATDDLSL SDRSRFWLAA LEASGQGVAI ADATHPDLIL TYVNSAFKKL
TGYNAAEALG KSCRFLQGSD RAQPGITTLR QAIRNGQACE VVLRNYRKDG SLFWNQLTIA
PITDGQGKVS HYVALQRDIT AFKEQEQALQ RQGIYDEHSG LPKRQLFLDR LNQALAWSQF
SGVPGALLLI DLGLPAHLDG SPSLSPDAEE NLEIIANRLQ AYVRPHETLA HLNHHQFGLL
LLDPDVQLRA EERAHGIQTL IRDRLAGFEG GAHIGIVPLT PETPATVLLQ AAEAAAMTAR
SQQQGHLSLE ASAIVAAPEQ YSRDRDWQQA IAAGELTLAL QPQMGLRNRQ LRGFEVQLRW
QHPQQGTLLA SQLMEHLEQS QHRETVGRWF LDQAGQLLSQ WRNSAQFSGL FALSLLPQQW
KSPSFIHDLR SLLETYQIPP EQLELDLPAQ SLAESAAESW DWVYAVRDLG IGIGLADFGS
RSIGLYDLRN LPLTTLKLER RFVRGLPDDA NDRAIVRGVV AMSQALKVRI VARGVDTVDQ
AKFLARAECD AMQGLAYSAP LTIEEALQVA RSPQAPAW
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