Gene Synpcc7942_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0174 
Symbol 
ID3775782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp173111 
End bp173989 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content61% 
IMG OID637798580 
Producthypothetical protein 
Protein accessionYP_399193 
Protein GI81298985 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC CTTGTCCTAG TACGCTCTAC CTCGTCGGCA CGCCGCTCGG CAACCTCGAG 
GACATCAGCT ATCGCGCCGT CAAAATTTTG CGCGGGGTAG ATGCGATCGC AGCTGAAGAT
ACGCGGCGTA CGGGGCGATT GTTACAAGCT TTGGGTATCG ATCGCCCCCA GGTGAGCTAC
CACGAGCACA ATCGTCAGCA GCGCGGACCA GAGCTGATTG CCCGTCTGCA AGCGGGTCAG
AGCATCGCCT TGGTCAGTGA TGCCGGCATG CCCGCGATCG CCGATCCGGG GCAGGAATTG
GTGCAAGCCG CGATCGCCGC AGGCTTAACG GTGGTGCCGA TCGCTGGCCC CAGTGCGGTG
ATCGCAGCCC TCTGTGCTTC GGGACTGTCG AGTGATCGCT TTGCCTTTGA AGGCTTTTTG
CCGGCTAAAC GCAAGGCACG ACGCGATGTT TTGCAATCGC TCCATCAGGA AGCCCGAACG
CTGATCTTCT ATGAGTCGCC CCATCGCCTA CGCGACACAC TGGAAGACCT CGCAGCGGTT
TTTGGGGGCG ATCGCGCGAT CGTCTTAGCC CGCGAACTCA CCAAGCTACA CGAGGAGTTT
TGGCGCGGCA GTGTGACCGA AGCGATCGCG GAATTTACGC GGCGGGAACC CCAAGGAGAA
TTTACGTTGG TCGTGGCTGG TGCAGTGGTG CAAACCCAAG CGCTCAGCGA AGACACACTC
CGGCAAGAGT TAGCAACACT GTTGGCGGCG GGCGTCTCCC GCTCTGAAGC CAGTCGGACG
CTCGCGGCTC AAACCGGTAC TCCTAAGCGG CGGCTCTATC AACTTGCCCT CGAAGTGCCA
CTGCCGGAAG ATGAAGGCGC TGCCTCTCCA GAGCCATGA
 
Protein sequence
MTEPCPSTLY LVGTPLGNLE DISYRAVKIL RGVDAIAAED TRRTGRLLQA LGIDRPQVSY 
HEHNRQQRGP ELIARLQAGQ SIALVSDAGM PAIADPGQEL VQAAIAAGLT VVPIAGPSAV
IAALCASGLS SDRFAFEGFL PAKRKARRDV LQSLHQEART LIFYESPHRL RDTLEDLAAV
FGGDRAIVLA RELTKLHEEF WRGSVTEAIA EFTRREPQGE FTLVVAGAVV QTQALSEDTL
RQELATLLAA GVSRSEASRT LAAQTGTPKR RLYQLALEVP LPEDEGAASP EP