| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0173 |
|---|
| Symbol | |
|---|
| ID | 3775781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 172202 |
|---|
| End bp | 173071 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637798579 |
|---|
| Product | 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase-like |
|---|
| Protein accession | YP_399192 |
|---|
| Protein GI | 81298984 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
|---|
| TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.82997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCTC TCCAGTCGAT CGCCGGTCAA CCCGTCGAGT CAGTTCTCGC GATCGCCCGT
CAAGTCGGCT GGGAAGCGGC AGACATTGCA CTGCAGTTCT ACACCGCTCA GTCTGAAGCA
GCACCGAAGC TGTGGCAGGA GGGGGATGAC CCCGTCACGG CAGCGGATTT GGCAATTCAT
CGCCACGTTC TGGAACGGCT ACAAACCGCT TTTGCCGATC AGCCCTTCGG CTACCTCAGC
GAAGAGAGCG ATCGCACCGC GCTGACTTTG CCACTGCCGG AAGAGTGGGT TTGGATCATC
GACCCCTTGG ATGGCACCCG CGATTTCATC GATCACACCG GCGAATTTGC GGTGCAGATT
GCCCTGACCT ACCAACAGCG CCCGGTCTTG GCGGTCGTCG CAATACCCGC TCAGCAGTTG
CTTTATTGGG CGGTACAAGG CCAGGGCTGC TACCGCGAAA CGCAAGACGG CACTCAGACG
AAATTGACGG TTTCCGATCG CCAAGAGGAT CTGATTCTGG TTGCCAGCCG AACCCATCGG
GGCGATCGCT TCCAGCAATT GCTCGATCGC CTTTCTTTGC CGCAGCAGAT TTATGTGGGC
AGTGTCGGCG TCAAAATTGT CGCGATCGCA GAACAACGCG CCGATGTTTA CCTCTCTCTC
TCGGGTAAAT CAGCCCCGAA AGATTGGGAC ATGGCCGCCC CCGAGCTACT CCTGCTCGAA
GCCGGTGGGC GCTTCAGCCA TGCCGATGGT TCTGCTCTTC GCTACAACAC CGGCGATATC
AGCCAGTGGG GTTGCTTGAT TGCCAGCAAC GGTCCCGCCC ACGATCGCCT CTGTCAAGAA
GCCACCGCAC TCCTTGCCAG CTTGGACTAG
|
|---|
| Protein sequence | MSPLQSIAGQ PVESVLAIAR QVGWEAADIA LQFYTAQSEA APKLWQEGDD PVTAADLAIH
RHVLERLQTA FADQPFGYLS EESDRTALTL PLPEEWVWII DPLDGTRDFI DHTGEFAVQI
ALTYQQRPVL AVVAIPAQQL LYWAVQGQGC YRETQDGTQT KLTVSDRQED LILVASRTHR
GDRFQQLLDR LSLPQQIYVG SVGVKIVAIA EQRADVYLSL SGKSAPKDWD MAAPELLLLE
AGGRFSHADG SALRYNTGDI SQWGCLIASN GPAHDRLCQE ATALLASLD
|
|---|
| |