Gene Synpcc7942_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0171 
Symbol 
ID3775779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp170797 
End bp171915 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content57% 
IMG OID637798577 
Productcysteine synthase A 
Protein accessionYP_399190 
Protein GI81298982 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGC GAGATATCCA CTTCGCTAAT CGTGACAGGA GACCAAGCCC CCTCGTTGGG 
GCTTTTTTAT TGAGGGTGAG AGAACCAAAG CAAGTTGGTA GGATCAAACC CGGCTGCCCA
ACCGAAAAAC GCATGGATAT CCGCAACGGC TTTATCGACA CCATCGGGAA TACGCCGCTG
ATTCGCCTCA ACAGCCTGAG CGAGGCGACT GGCTGTAACA TTCTCGGCAA AGCCGAGTTC
CTCAACCCGG GTGGATCGGT CAAGGATCGG GCGGCGCTGT TCATCATTGA AGACGCCGAG
CGGCAGGGTA AATTACGGCC GGGCGGGACG GTTGTTGAAG GAACGGCGGG CAATACGGGC
ATCGGTCTAG CACATATCTG CAATGCCAAG GGCTACCGCT GCCTGATTGT GATTCCTGAG
ACGCAATCGC AGGAAAAGAT TGACCTACTA CGAACACTGG GCGCGGAAGT GCGAACTGTC
CCTGCAGTGC CCTATCGCGA TCCCAACAAC TACGTCAAAG TCTCGGGGCG CCTCGCAGAA
GAACTGGACA ATGCTATTTG GGCGAACCAA TTCGACAATT TAGCCAACCG CCAAGCCCAC
TACGCGACAA CTGGCCCCGA AATTTGGCAG CAGACCGAAG GAACTGTTGA TGCGTGGGTG
GCGGCAACGG GTACCGGTGG AACCTATGCG GGTGTTGCAC TCTACCTGAA AGAGCAAAGT
TCTAAGGTGC GCTGCGTTGT GGCTGACCCG ATGGGCAGCG GCCTCTACAG CTGGGTCAAA
ACCGGCGAAA TTCATCTCGA AGGTAGCTCA GTCACCGAAG GCATCGGCAA CAGCCGGATT
ACGGCCAACA TGCAAGATGT ACCGATCGAC GATGCGATTC AGATTGCTGA CCCTGAAGCC
CTGGAGATCA TCTATCAACT GCTGCACCGC GATGGCCTCT TCATGGGCGG CTCCGTGGGG
ATCAATGTCG CGGCGGCCTA TCGCCTCGCC AAGGAAATGG GGCCGGGCCA CACGATCGTG
ACGGTACTTT GTGATGGCGG TGCCCGCTAT CAATCGCGAC TCTTCAACGC CGAGTGGCTG
GCCTCAAAAG GGCTGCAAAT GCCGCAGGTG ACAACATGA
 
Protein sequence
MAARDIHFAN RDRRPSPLVG AFLLRVREPK QVGRIKPGCP TEKRMDIRNG FIDTIGNTPL 
IRLNSLSEAT GCNILGKAEF LNPGGSVKDR AALFIIEDAE RQGKLRPGGT VVEGTAGNTG
IGLAHICNAK GYRCLIVIPE TQSQEKIDLL RTLGAEVRTV PAVPYRDPNN YVKVSGRLAE
ELDNAIWANQ FDNLANRQAH YATTGPEIWQ QTEGTVDAWV AATGTGGTYA GVALYLKEQS
SKVRCVVADP MGSGLYSWVK TGEIHLEGSS VTEGIGNSRI TANMQDVPID DAIQIADPEA
LEIIYQLLHR DGLFMGGSVG INVAAAYRLA KEMGPGHTIV TVLCDGGARY QSRLFNAEWL
ASKGLQMPQV TT