Gene Synpcc7942_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0164 
Symbol 
ID3775772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp164548 
End bp164967 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content55% 
IMG OID637798570 
ProductIojap-related protein 
Protein accessionYP_399183 
Protein GI81298975 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGG CTTCTCCGTC TTTGCCTACG CTCATTGATG ATTCGGCCTT GGCTTTGACC 
TTGGCAGCAG CAACGGCAGC AGACGATCGC AAGGCAGGAG ATATCGCGAT TCTGCGGGTC
TCTGAGGTGG CCTATCTCGC GGATTATTTC CTGATTTGCA GCGGCTTTTC AATCACGCAA
GTTCGTGCGA TCGCGCGATC GATTGAAGAA AAACTCAGCG AAGACTTTCA GCGTTTGCCG
CTGCGTAGCG AAGGGATGGC TGAAGGTCGT TGGGTACTGC TGGACTACGG TGATCTGATC
GTCCATATCT TCCTGCCCCA AGAACGCGAA TTCTACGATC TCGAAGCTTT TTGGGGACAT
GCGGAGCGGC TGCCCTTCGA GCCACCGGCC CCTCCCGACC TGTCATCGTC GAATCTGTAA
 
Protein sequence
MTLASPSLPT LIDDSALALT LAAATAADDR KAGDIAILRV SEVAYLADYF LICSGFSITQ 
VRAIARSIEE KLSEDFQRLP LRSEGMAEGR WVLLDYGDLI VHIFLPQERE FYDLEAFWGH
AERLPFEPPA PPDLSSSNL