Gene Synpcc7942_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0160 
Symbolera 
ID3773500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp161726 
End bp162661 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content56% 
IMG OID637798566 
ProductGTP-binding protein Era 
Protein accessionYP_399179 
Protein GI81298971 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.709103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC TTTTCACCAC GATTCCGGTT GCCCCAGAGG GCTTTCGTTC GGGCTTTGTG 
GCGCTGATCG GGCGGCCCAA TGTGGGCAAG TCAACCTTGA TGAACCACTT GGTCGGGCAA
AAAATTGCGA TTACCTCGCC AGTGGCGCAA ACCACCCGCA ATCGGCTACG GGGTGTGCTG
ACGACGGATC AAGTTCAGAT TGTCTTTGTC GATACCCCCG GCATTCACAA GCCCCAGCAC
CAGCTCGGCA GCGTCTTAGT GCAAAACGCC AGCAGTGCGA TTCGGATTGT GGACCTCGTG
CTGTTTGTTG TTGATGGCAG TGTGCCGGCA GGACGGGGTG ATGCTTTTAT CGCGGATTTG
ATTCAACGGG CTGGCGTGCC GACGGTTCTT GGCCTAAACA AGGTCGATCG CCAGTTACCA
GAAGATGCAG AAGCGATCGC GGCCAGCTAT GCGCAACTCG CGGGCGATCG CGATTGGCCG
TTGCAGACCT TCTCAGCCAC AACCGGTGCA GGAACAGGTG CTTTGCTGGA ACAGCTGACC
CACGCTCTAG AACCTGGGCC CTATTACTAC CCGCCCGACC TCATCACCGA TCAGCCCGAG
CGCTTCATCA TGGCAGAGCT GATTCGTGAG CAAATTTTGC TGCAAACCCG CGAGGAAGTG
CCGCACTCCG TCGCGGTGGT GATTGAACGG GTTGAAGAGG ATGAAAAGAT CACCCGCATC
CTTGCCATGA TTTGCGTGGA ACGCCCCTCT CAGAAAGCGA TCTTGATTGG CAAGGGTGGC
TCGATGATGA AGGCGATCGG CAGCGAAGCT CGCCAGCAAA TGCAGAAGCT GATCGACGGC
AAAATTTACC TAGAACTATT CGTCAAAGTC CAGCCCAAGT GGCGACAATC GCGCAGCCAA
TTGGAAGAGC TGGGCTACCG ACCTGAGAGT GAGTAA
 
Protein sequence
MSDLFTTIPV APEGFRSGFV ALIGRPNVGK STLMNHLVGQ KIAITSPVAQ TTRNRLRGVL 
TTDQVQIVFV DTPGIHKPQH QLGSVLVQNA SSAIRIVDLV LFVVDGSVPA GRGDAFIADL
IQRAGVPTVL GLNKVDRQLP EDAEAIAASY AQLAGDRDWP LQTFSATTGA GTGALLEQLT
HALEPGPYYY PPDLITDQPE RFIMAELIRE QILLQTREEV PHSVAVVIER VEEDEKITRI
LAMICVERPS QKAILIGKGG SMMKAIGSEA RQQMQKLIDG KIYLELFVKV QPKWRQSRSQ
LEELGYRPES E