Gene Synpcc7942_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0159 
Symbol 
ID3773499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp161198 
End bp161632 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content57% 
IMG OID637798565 
ProductMov34/MPN/PAD-1 
Protein accessionYP_399178 
Protein GI81298970 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.843798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGC TGCTCCTGCC CGCGACCTGT CGTCACACGA TCGCCGTTCA TTTACAGCAG 
TGCTATCCCC AAGAAGGTTG CGGTTTGCTG TTGGGAGTGG ACAGACGAGT TGAACAGGTT
TGGCCCGCCA CCAATGTCTG GCAGCCTGAG GACACCGATG AGGATCACGA TCGCTGCGAT
CGCTATCAAG TTGATCCCCA AGCACTCCTG CAAGCCCAGC GCTACTGCCG CGACCGCCAA
TGGCAAATTC TCGGCATTTA TCATTCGCAT CCCGACCATC CGGCGGTTCC CTCAGAATGC
GATCGCCAGC AGGCTTGGCC TGAGTATGTT TACCTCATCG CCTCAGTCAC GCAAGGTAAG
ATTGAAGACT GTCGTTGTTG GCACCTGAAC GACCAACGAC AGTTTGAGGC GATCGCGATC
GCCGAGCCGA CCTGA
 
Protein sequence
MLTLLLPATC RHTIAVHLQQ CYPQEGCGLL LGVDRRVEQV WPATNVWQPE DTDEDHDRCD 
RYQVDPQALL QAQRYCRDRQ WQILGIYHSH PDHPAVPSEC DRQQAWPEYV YLIASVTQGK
IEDCRCWHLN DQRQFEAIAI AEPT