Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0148 |
Symbol | |
ID | 3773488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 148646 |
End bp | 150190 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637798554 |
Product | hypothetical protein |
Protein accession | YP_399167 |
Protein GI | 81298959 |
COG category | [S] Function unknown |
COG ID | [COG2187] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.79926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGATG CTGCTCTGCC TCCTTTAATT CAGCAGATGT TGCAGCCTGA GTTTTATCCG CATGTGGTTG AAGCCCCAGT CCAGCTTTAT CAAACGCACT GCTCCTACGT TCTGCTGACT GGTCCCTATG CTTACAAGCT GAAAAAACCG GTTAATTTTG GCTTTTTAGA TTATTCAACA CTCGAAAAGC GCCAGCATTT TCTCCAGGAA GAACTGCGGC TCAATCAACG GACTGCTGCC CCGCTTTATC AGCAAGTCTT GGCAATTTCA CAAGCCGGCG ATCGCTATCA GTTTGCTGAA ACAGAGCCAG CCGCTGAATA TGTGTTGCAG ATGAAGCAGT TTCCCAAGGG CTGCTTATTT TCGGAACAAT TTGAGTCTGG TCAGCTCGAT GCTAGCGTGA TGCGGCAATT GGCAGCGGTC GTTGCTGAGT TTCATACTAA AACCTGGGTT GATGACCATG TCCGCAGCTA CGGTCAAGTT GCCCAGATCC GCAAAGCATT TGATGAGAAC TATCAGCAGA CTCTGCACTA TATCGGCGGT CCACAGACTC AGGCTCAATT TGACACAACC AAAGCCTTTA GCGATCGCTT CTTTGATACG AAAGCTGACC TATTTGCAGC GCGGCTGGCT GCTGACAAAA TCCGGGAATG CCATGGCGAT CTGCATTTAG GCAATCTCTG CCGTTGGGAC AATCAACTCT TCCTCTTTGA CTGCATTGAG TTCAATGAGC CATTTCGCTT TGTCGACACC ATGTACGACA TCGCCTTCTT GGTCATGGAC TTGGATGCGC GGGGACGCCA AGATTTAGGC ACAGCTTTTC TCAATGCCTA TGCTGAAATG AGTGGCGATT GGGAAGGGCT ACAGGTTTTG CCCCTGTATT TGAGTCGTCA AGCCTATGTC CGCGCAAAAG TCACTTCGTT TCTGTTAGAT GATCCAGCAA TTGACAGCGA TCGCCGGCAA CAGGCGTTTG ATCAAGCGGC TGCTTACTAT CAGTTAGCTC ATGCCTATGC CCAGCCGGCT CAGCAGGGAG AATTGCTGCT CCTCAGTGGT CTTTCGGGCT CGGGTAAGTC CACCCTAGGA CGCACGATCG CGGAACGGCA GAGAGCCATC ATTTTGCGAT CGGACGCTGT CCGCAAGCAT TTGGCGGGTA TCTCGCTCTT GGAACGGGGC GGGCCTGAGA TCTACAGCCC TGAAATGAGC GATCGCACTT ATGGTCGCCT CCTGTACCTA GGACTGGGCC TCGCTCAAGC GGGCTATCGC GTCATACTCG ATGCGAAATA CGACCGACAA GCCTATCGAG GGGCTGCCCT AACAGCAGCT CAGGCTCAAC AAATTCCGAT TCAGATTCTG CATTGCCAAG CTTCGGAAGA AACGTTGCGG CAACGACTGC AAGCCCGCCA AGGGGATATC GCAGATGCAA CTGCTGATTT ACTCGCTCAG CAACTTACTG CTTGGCAAGA CTTTAGTGAA GATGAGCAAG GATTCGTGCG AGCGATCGCG ACGGAAAAGC CTCTGACTCA GCAACTGGAC GCTTTGGGTT TTTAG
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Protein sequence | MTDAALPPLI QQMLQPEFYP HVVEAPVQLY QTHCSYVLLT GPYAYKLKKP VNFGFLDYST LEKRQHFLQE ELRLNQRTAA PLYQQVLAIS QAGDRYQFAE TEPAAEYVLQ MKQFPKGCLF SEQFESGQLD ASVMRQLAAV VAEFHTKTWV DDHVRSYGQV AQIRKAFDEN YQQTLHYIGG PQTQAQFDTT KAFSDRFFDT KADLFAARLA ADKIRECHGD LHLGNLCRWD NQLFLFDCIE FNEPFRFVDT MYDIAFLVMD LDARGRQDLG TAFLNAYAEM SGDWEGLQVL PLYLSRQAYV RAKVTSFLLD DPAIDSDRRQ QAFDQAAAYY QLAHAYAQPA QQGELLLLSG LSGSGKSTLG RTIAERQRAI ILRSDAVRKH LAGISLLERG GPEIYSPEMS DRTYGRLLYL GLGLAQAGYR VILDAKYDRQ AYRGAALTAA QAQQIPIQIL HCQASEETLR QRLQARQGDI ADATADLLAQ QLTAWQDFSE DEQGFVRAIA TEKPLTQQLD ALGF
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