Gene Synpcc7942_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0148 
Symbol 
ID3773488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp148646 
End bp150190 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content52% 
IMG OID637798554 
Producthypothetical protein 
Protein accessionYP_399167 
Protein GI81298959 
COG category[S] Function unknown 
COG ID[COG2187] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.79926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATG CTGCTCTGCC TCCTTTAATT CAGCAGATGT TGCAGCCTGA GTTTTATCCG 
CATGTGGTTG AAGCCCCAGT CCAGCTTTAT CAAACGCACT GCTCCTACGT TCTGCTGACT
GGTCCCTATG CTTACAAGCT GAAAAAACCG GTTAATTTTG GCTTTTTAGA TTATTCAACA
CTCGAAAAGC GCCAGCATTT TCTCCAGGAA GAACTGCGGC TCAATCAACG GACTGCTGCC
CCGCTTTATC AGCAAGTCTT GGCAATTTCA CAAGCCGGCG ATCGCTATCA GTTTGCTGAA
ACAGAGCCAG CCGCTGAATA TGTGTTGCAG ATGAAGCAGT TTCCCAAGGG CTGCTTATTT
TCGGAACAAT TTGAGTCTGG TCAGCTCGAT GCTAGCGTGA TGCGGCAATT GGCAGCGGTC
GTTGCTGAGT TTCATACTAA AACCTGGGTT GATGACCATG TCCGCAGCTA CGGTCAAGTT
GCCCAGATCC GCAAAGCATT TGATGAGAAC TATCAGCAGA CTCTGCACTA TATCGGCGGT
CCACAGACTC AGGCTCAATT TGACACAACC AAAGCCTTTA GCGATCGCTT CTTTGATACG
AAAGCTGACC TATTTGCAGC GCGGCTGGCT GCTGACAAAA TCCGGGAATG CCATGGCGAT
CTGCATTTAG GCAATCTCTG CCGTTGGGAC AATCAACTCT TCCTCTTTGA CTGCATTGAG
TTCAATGAGC CATTTCGCTT TGTCGACACC ATGTACGACA TCGCCTTCTT GGTCATGGAC
TTGGATGCGC GGGGACGCCA AGATTTAGGC ACAGCTTTTC TCAATGCCTA TGCTGAAATG
AGTGGCGATT GGGAAGGGCT ACAGGTTTTG CCCCTGTATT TGAGTCGTCA AGCCTATGTC
CGCGCAAAAG TCACTTCGTT TCTGTTAGAT GATCCAGCAA TTGACAGCGA TCGCCGGCAA
CAGGCGTTTG ATCAAGCGGC TGCTTACTAT CAGTTAGCTC ATGCCTATGC CCAGCCGGCT
CAGCAGGGAG AATTGCTGCT CCTCAGTGGT CTTTCGGGCT CGGGTAAGTC CACCCTAGGA
CGCACGATCG CGGAACGGCA GAGAGCCATC ATTTTGCGAT CGGACGCTGT CCGCAAGCAT
TTGGCGGGTA TCTCGCTCTT GGAACGGGGC GGGCCTGAGA TCTACAGCCC TGAAATGAGC
GATCGCACTT ATGGTCGCCT CCTGTACCTA GGACTGGGCC TCGCTCAAGC GGGCTATCGC
GTCATACTCG ATGCGAAATA CGACCGACAA GCCTATCGAG GGGCTGCCCT AACAGCAGCT
CAGGCTCAAC AAATTCCGAT TCAGATTCTG CATTGCCAAG CTTCGGAAGA AACGTTGCGG
CAACGACTGC AAGCCCGCCA AGGGGATATC GCAGATGCAA CTGCTGATTT ACTCGCTCAG
CAACTTACTG CTTGGCAAGA CTTTAGTGAA GATGAGCAAG GATTCGTGCG AGCGATCGCG
ACGGAAAAGC CTCTGACTCA GCAACTGGAC GCTTTGGGTT TTTAG
 
Protein sequence
MTDAALPPLI QQMLQPEFYP HVVEAPVQLY QTHCSYVLLT GPYAYKLKKP VNFGFLDYST 
LEKRQHFLQE ELRLNQRTAA PLYQQVLAIS QAGDRYQFAE TEPAAEYVLQ MKQFPKGCLF
SEQFESGQLD ASVMRQLAAV VAEFHTKTWV DDHVRSYGQV AQIRKAFDEN YQQTLHYIGG
PQTQAQFDTT KAFSDRFFDT KADLFAARLA ADKIRECHGD LHLGNLCRWD NQLFLFDCIE
FNEPFRFVDT MYDIAFLVMD LDARGRQDLG TAFLNAYAEM SGDWEGLQVL PLYLSRQAYV
RAKVTSFLLD DPAIDSDRRQ QAFDQAAAYY QLAHAYAQPA QQGELLLLSG LSGSGKSTLG
RTIAERQRAI ILRSDAVRKH LAGISLLERG GPEIYSPEMS DRTYGRLLYL GLGLAQAGYR
VILDAKYDRQ AYRGAALTAA QAQQIPIQIL HCQASEETLR QRLQARQGDI ADATADLLAQ
QLTAWQDFSE DEQGFVRAIA TEKPLTQQLD ALGF