Gene Synpcc7942_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0137 
SymbolhemH 
ID3773477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp138115 
End bp139278 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content58% 
IMG OID637798543 
Productferrochelatase 
Protein accessionYP_399156 
Protein GI81298948 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.746072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.501858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGCG TCGGCGTCTT GCTACTCAAC CTCGGCGGTC CCGAACGCCT AGAGGATGTT 
GGCCCCTTTC TGTACAACCT CTTTGCCGAT CCCGAGATCA TTCGCCTGCC ATTTCCTTGG
CTGCAAAAGC CGCTGGCTTG GCTAATCTCG AGTTTGCGAA CCCGCAAATC GCAAGAGAAT
TACAAGCAAA TTGGCGGGGG GTCACCTCTG CGCCGCATTA CCGAAGAGCA GGCCACAGCC
CTGCGTCAAT CCCTGAGCGA TCGCGGTCAA GCCGCTCAGG TCTACATCGG TATGCGCTAC
TGGCATCCCT TCACTGAAGA GGCGATCGCC CAGATTAAGG CCGACGGCAT TGACCGCTTG
GTGATCCTGC CGCTTTATCC GCAGTTCTCG ATCAGTACCA GCGGCTCCAG CTTCCGCCTG
CTACAGCGGC TGCGCGATCG AGATCCCGAA TTCCAAAAGA TTGACTGCTC AGTCGTACCC
TCTTGGTATG AGCGATCGGG CTATCTGCAG GCCATGGCCG AGCTGATTGC CCAGGAACTC
GACAAACTCG AGCAACCGGA ACAGGGCCAC GTCTTCTTCA GTGCCCACGG GGTGCCAGTC
AGCTACGTCG AGGAAGCTGG CGATCCCTAC CAGCGGGAAA TCGAAGATTG CACCCGCAAG
ATCATGGAAA CCTTGGGGCG TTCGAACCCT TGGACCTTGG CCTATCAAAG TCGAGTCGGT
CCCGTCGAGT GGCTGCAGCC CTACACCGAG GACGCGCTCG AAGAGCTTGC AGAGAGAGGG
GTCAAGGATC TGGTTGTGGT GCCGATCAGC TTCGTGTCGG AGCACATCGA AACCCTCGAA
GAGATTGACA TCGAGTACCG AGAAATCGCT GAAGAAGCGG GCATTGAACG CTTCCTGCGG
GTGCCGGCCC TCAATACCCA TCCCTTGTTC ATTCAAGATC TGAGCGATCT AGTGGAGCAA
ACCTTAGAGC AGCCGCGCTT CCGCCTTGAA GATGTCACCT TGCTGCCCAA AAAAGTAAAG
CTCTACCCCC AAGAACGGTG GGAGTGGGGG ATTACCCTCA ATGCCGAGGT CTGGAATGGT
CGGATTGCCA TGCTTGGCTT CCTCGCTTTG CTTGTGGAGC TCCTGACGGG CCGCGGGCCG
CTGCATGCCT TGGGGTTGCT CTAG
 
Protein sequence
MGRVGVLLLN LGGPERLEDV GPFLYNLFAD PEIIRLPFPW LQKPLAWLIS SLRTRKSQEN 
YKQIGGGSPL RRITEEQATA LRQSLSDRGQ AAQVYIGMRY WHPFTEEAIA QIKADGIDRL
VILPLYPQFS ISTSGSSFRL LQRLRDRDPE FQKIDCSVVP SWYERSGYLQ AMAELIAQEL
DKLEQPEQGH VFFSAHGVPV SYVEEAGDPY QREIEDCTRK IMETLGRSNP WTLAYQSRVG
PVEWLQPYTE DALEELAERG VKDLVVVPIS FVSEHIETLE EIDIEYREIA EEAGIERFLR
VPALNTHPLF IQDLSDLVEQ TLEQPRFRLE DVTLLPKKVK LYPQERWEWG ITLNAEVWNG
RIAMLGFLAL LVELLTGRGP LHALGLL