Gene Synpcc7942_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0132 
Symbol 
ID3773472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp132721 
End bp133770 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content61% 
IMG OID637798538 
Producthypothetical protein 
Protein accessionYP_399151 
Protein GI81298943 
COG category[R] General function prediction only 
COG ID[COG3380] Predicted NAD/FAD-dependent oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.751971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.181819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAGT CGCTGGAAAC CCTAGACGCG ATCGTGGTGG GGGCTGGCTG GGCTGGGCTC 
ACCTGTGCGC GATCGCTACA GGCTGCAGGT TGGACGGTGC AAGTCTTGGA AAAGTCGCGG
GGCTGGGGCG GTCGGGCAGC ACGACGACGA TTGGAGTTGG GTGGGTTTGC AGAACATGGC
TTGCCAGCGC TGGCTGAGGG GTGGTCGTCT GTCGACTCGC TGATTGCACT CGGCCGCGAT
CGCGGGTTGC TGGAACTCTG GCAGGCAGAC CATTGGCACT ATAGTCACGG TCAACTAGAG
CCGCGATCGC TACCGACCCA GTGGATGGCT CCGGCTGGAT TGAGCGGCTT GGCTCGCGCT
TATGGCGAAG GCCTCAGCAT TGAGATCCAG CGACAGGTCA ACCAAGTGAC TTGGCAGGGC
GATCGCTGGT GCGTTCAGAC TGAGCAGGGC GATCGTTACA CGGCCCGTTA CCTTGGCCTC
TTTGTGCCAG CGCCTCAGGC AGAGGTGTTA GTTCCATCTG AATGGCAACC TCCGACTCTT
GCCAGCGTAA GTTACGACCC TTGCATCACA GTGATTGCAA CCTACGGCGA TCACATTTTG
ACGGGCCCCG CAGCGGCCAC AACAGGCTGG GCGATCGCGG CTTCAGGACG GAACTGGCGC
TGGCTAGGGC TCGACAGCAG TAAGCGGCAG CAGCCTTCTG AAAGTGTTTG TGTCCTGCAC
AGCAGCGCAG CCTGGGCTGA GGCTCATTTT GACGATGTTG ACTTGGGCAA AGCCGGTCAA
GCGCTTCTCC AAGAAGCGGC TACAGATTTG GCAATGCCAC TCCTGTCGGC GCGATCGCTA
CAGGTGCATC GCTGGCGCTA TGCCTTGCCC CAGACTTCTG TGGCTGACCT AGTGCTACGG
CTGGGCGATC GTGGCGTTTG TGGCGGGGAC TGGTGCTCTG GCGGTGAGCC CGCGACGATT
CCTGAGCAAT CGATCGGTGG TAGTACCTTC GTCGCCGGCG CGATCGCCTC AGGGCAAGCA
GGGGCTCAGC ATCTGCTTCA GGCTGACTGA
 
Protein sequence
MSESLETLDA IVVGAGWAGL TCARSLQAAG WTVQVLEKSR GWGGRAARRR LELGGFAEHG 
LPALAEGWSS VDSLIALGRD RGLLELWQAD HWHYSHGQLE PRSLPTQWMA PAGLSGLARA
YGEGLSIEIQ RQVNQVTWQG DRWCVQTEQG DRYTARYLGL FVPAPQAEVL VPSEWQPPTL
ASVSYDPCIT VIATYGDHIL TGPAAATTGW AIAASGRNWR WLGLDSSKRQ QPSESVCVLH
SSAAWAEAHF DDVDLGKAGQ ALLQEAATDL AMPLLSARSL QVHRWRYALP QTSVADLVLR
LGDRGVCGGD WCSGGEPATI PEQSIGGSTF VAGAIASGQA GAQHLLQAD