Gene Synpcc7942_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0124 
Symbol 
ID3773464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp124070 
End bp124669 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content58% 
IMG OID637798530 
Productthiol methyltransferase 1-like 
Protein accessionYP_399143 
Protein GI81298935 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG CGGTCAACCA AGCGCAATTC TGGGAACAGC GCTATCAGGA GGGCAGCGAT 
CGCTGGGATT TGGGGCAGGC GGCTCCTGTT TGGCGATCGT TACTGGCAGG GACTAATGCA
CCAGCACCCG GACGGATTGC TGTGCTGGGC TGTGGTCGCG GTCACGATGC CCGTCTGTTT
GCTGAGCAGG GATTTGAGGT CGTGGGCTTT GATTTTGCCC CCAGTGCGAT CGCAGCGGCT
CAAGCATTGG CGCAGGGGAC AACAGCTCAG TTTCTGCAGC GGGATATTTT TGCGCTGCCC
CAAGAATTTG CCGGTCAGTT TGACACTGTG CTGGAACATA CCTGTTTCTG TGCGATCGAT
CCCGATCGCC GAGCAGAGTA TGTCGAAGTC GTGCGACAGA TTCTCAAGCC CAAGGGCTGC
TTGTTGGGAC TGTTCTGGTG CCATGATCGC CCCTCAGGAC CGCCCTATGG CTGCAGCCTG
ACTGAGCTGC GCGATCGCTT TGCTCAAGGC TGGCAAGAAG AGCAACTGGA GTCAGTCACC
GAGTCTGTCG AAGGACGGCG TGGCGAAGAG TACCTCGGTC GCTGGCGTCG GTTGGACTAA
 
Protein sequence
MTNAVNQAQF WEQRYQEGSD RWDLGQAAPV WRSLLAGTNA PAPGRIAVLG CGRGHDARLF 
AEQGFEVVGF DFAPSAIAAA QALAQGTTAQ FLQRDIFALP QEFAGQFDTV LEHTCFCAID
PDRRAEYVEV VRQILKPKGC LLGLFWCHDR PSGPPYGCSL TELRDRFAQG WQEEQLESVT
ESVEGRRGEE YLGRWRRLD