Gene Synpcc7942_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0120 
Symbol 
ID3773460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp119508 
End bp119993 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content55% 
IMG OID637798526 
Productcytosine/adenosine deaminase-like 
Protein accessionYP_399139 
Protein GI81298931 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.585423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTGG CGGAAGACGA GCGCTTTATG CGACGGGCGA TCGCGCTGAG TCGGCAAGCA 
GGATTGATCG ATTGTACGGG CGGGCCTTTT GGCTGTGTAA TCACTCGCAA CGGCGAGATC
ATCGCGGAAG GCTTCAATCA AGTCCTGACT GAAAGGGACC CGACTTGGCA TGCTGAAATC
GCCGCCATTC GACAAGCTTG CCAGCACCTA CAAACTGTTG ATTTATCGGG ATGCACGCTC
TACACCAGCG CGGAACCCTG TCCGATGTGT GCGGCAGCCG TTTACTGGGC CAAGCTCGAT
CGCCTTGTTT TTGCGACCCG CTGCTCTGAC ACTGCTGCCT ACGCCGAGTT TGATGACAGC
ACTATCTATG CTGAGATCCA AAAGCCAGCC CGCGATCGCA CAATTCCCCA TCAAGAACTG
CTGCGATCGG AAGCTCAGAT CGTTTGGCAA GACTATCAGC AACAACGCGA TCGCACCCCG
AATTGA
 
Protein sequence
MSLAEDERFM RRAIALSRQA GLIDCTGGPF GCVITRNGEI IAEGFNQVLT ERDPTWHAEI 
AAIRQACQHL QTVDLSGCTL YTSAEPCPMC AAAVYWAKLD RLVFATRCSD TAAYAEFDDS
TIYAEIQKPA RDRTIPHQEL LRSEAQIVWQ DYQQQRDRTP N