Gene Synpcc7942_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0116 
Symbol 
ID3773456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp114299 
End bp115273 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content57% 
IMG OID637798522 
Productfructokinase 
Protein accessionYP_399135 
Protein GI81298927 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.393597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCC AAGCGCCAAC GGTCATCTGT CTGGGAGAAA TGCTCTGGGA TTGTTTGGCC 
AACGATCGCG ATCTTCCGGC GGAACAGGTG CAAAGTTGGA CACCTTGGCC GGGGGGTGCT
CCCGCCAATG TTGCAACGGC GCTAGTCAAG CTTGGTGTTC AGTCGGGACT GATTACCTGC
CTCGGTTCTG ATCCTGAAGG CGATCGCCTC TTTCAAGTTC TCCAAGACAA TGGCGTGGCG
ATCGCGGCGG TGCAGCGGCA TCCCCGCCTG CCGACCCGAC AGGTGCAAGT GCTGCGAACC
GCTCAGGGCG ATCGCCAGTT CGGAGGGTTT GGCGCGATCG CTTGCGATCA ATTTGCGGAT
ACGGAACTGC AAGCGGAGCA GTTGCCGCAG GCTTGGTTTC GTTTGGCCAA AGTGCTCTGC
TTAGGCACGA TTCCGCTGGC TTATCCCAGT AGTGCGATCG CGGCGCAGCA AGCGCTGACT
TGGGCCAATC AGCAGGGAAT GACCGTTCTC TTGGATGTCA ACTGGCGACC AAGTTTCTGG
CCTGATCCCA GTTTGGCTCC CGATCGCATT CGTGCCATCC TGCCTCAAAT TCAGCAGTTG
AAATTAGCGA GAGAAGAAGC GGAATGGCTG TTCGACACGG TTGATCCAGC AACAATTCAA
GCCCGACAAC CGCAGCTACA AGCAGTATTG ATTACGGATG GCGATCGCGG CTGCCACTAC
TGGGTTGCTG GTTGGCAGGG TCACTGTCCC TCTTTTCCGG TAAAGGCGAT CGATACGACC
GGCGCGGGAG ATGCATTTGT CGCTGCTTGG CTAGCGCAAA ACACGCAAAT GGACTTCCAG
TGGACGAGCG CAGAGCAGGT GCAAACAGCG ATTCGCTGGG CTAGTGCTGC TGGTGCCTTG
ACGACCCTGA ATCCTGGCGC GATCGCAGCT CAGCCGACTT CTGATGCTAT TCAATCTTTA
CTATCTAAAA CTTAA
 
Protein sequence
MTAQAPTVIC LGEMLWDCLA NDRDLPAEQV QSWTPWPGGA PANVATALVK LGVQSGLITC 
LGSDPEGDRL FQVLQDNGVA IAAVQRHPRL PTRQVQVLRT AQGDRQFGGF GAIACDQFAD
TELQAEQLPQ AWFRLAKVLC LGTIPLAYPS SAIAAQQALT WANQQGMTVL LDVNWRPSFW
PDPSLAPDRI RAILPQIQQL KLAREEAEWL FDTVDPATIQ ARQPQLQAVL ITDGDRGCHY
WVAGWQGHCP SFPVKAIDTT GAGDAFVAAW LAQNTQMDFQ WTSAEQVQTA IRWASAAGAL
TTLNPGAIAA QPTSDAIQSL LSKT