Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0112 |
Symbol | |
ID | 3773452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 111686 |
End bp | 113140 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637798518 |
Product | deoxyribodipyrimidine photo-lyase type I |
Protein accession | YP_399131 |
Protein GI | 81298923 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | [TIGR03556] deoxyribodipyrimidine photo-lyase, 8-HDF type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00531501 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGCTC CGATTCTGTT TTGGCACCGG CGTGACCTGC GCCTCAGCGA CAACATTGGT CTGGCGGCGG CGCGGGCACA ATCAGCGCAG CTGATCGGTC TGTTTTGCCT CGACCCTCAG ATTCTCCAGA GTGCTGACAT GGCGCCAGCA CGGGTTGCCT ACCTGCAGGG CTGCCTACAG GAACTCCAGC AGCGTTATCA ACAGGCGGGC AGTCGGCTGC TATTGCTCCA AGGGGATCCA CAACACCTGA TCCCGCAACT GGCGCAGCAG CTTCAGGCGG AAGCAGTTTA TTGGAACCAA GACATTGAAC CCTACGGCCG CGATCGCGAT GGGCAGGTCG CAGCCGCTCT GAAAACGGCA GGCATTCGGG CTGTTCAACT CTGGGATCAA CTGCTCCATA GCCCCGATCA AATCCTCAGC GGCAGCGGTA ATCCCTACAG CGTCTACGGG CCGTTTTGGA AAAATTGGCA GGCTCAGCCC AAGCCCACGC CGGTTGCCAC ACCGACAGAA CTGGTCGATC TCTCACCAGA GCAACTAACT GCGATCGCAC CTCTGCTGTT GTCGGAACTA CCGACCCTGA AGCAGCTTGG CTTTGACTGG GACGGGGGTT TTCCAGTGGA GCCGGGGGAA ACAGCGGCGA TCGCCCGTCT TCAAGAATTT TGCGATCGCG CGATCGCCGA CTACGATCCC CAGCGCAATT TTCCGGCGGA AGCAGGAACC TCGGGCTTGA GTCCCGCTTT GAAATTCGGG GCGATCGGTA TTCGTCAGGC TTGGCAGGCT GCCAGTGCAG CCCATGCCCT CAGCCGCAGC GACGAAGCCC GCAACAGCAT TCGCGTTTGG CAGCAGGAAC TCGCTTGGCG GGAGTTCTAT CAGCATGCGC TCTACCATTT CCCGAGCCTG GCCGATGGTC CCTATCGCTC GCTCTGGCAG CAATTCCCTT GGGAAAATCG CGAGGCTCTG TTCACGGCTT GGACCCAGGC GCAAACGGGC TATCCGATTG TTGATGCAGC GATGCGCCAA CTGACTGAAA CCGGCTGGAT GCACAACCGT TGCCGGATGA TTGTTGCCAG CTTTTTGACC AAGGATTTGA TCATCGACTG GCGGCGTGGG GAGCAGTTCT TTATGCAGCA CTTGGTCGAT GGCGATCTGG CTGCAAATAA CGGCGGTTGG CAGTGGAGCG CTTCCAGTGG CATGGATCCC AAACCGCTGC GGATTTTCAA TCCTGCTAGT CAGGCCAAGA AGTTTGATGC CACGGCGACC TACATCAAAC GTTGGCTGCC AGAACTGCGC CATGTCCATC CCAAGGACTT GATCAGTGGG GAGATCACGC CGATTGAACG CCGAGGCTAT CCTGCCCCGA TCGTGAATCA CAACCTGCGC CAGAAACAGT TCAAGGCGCT CTACAACCAG CTCAAAGCGG CTATCGCTGA ACCTGAGGCT GAGCCCGATT CATAG
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Protein sequence | MAAPILFWHR RDLRLSDNIG LAAARAQSAQ LIGLFCLDPQ ILQSADMAPA RVAYLQGCLQ ELQQRYQQAG SRLLLLQGDP QHLIPQLAQQ LQAEAVYWNQ DIEPYGRDRD GQVAAALKTA GIRAVQLWDQ LLHSPDQILS GSGNPYSVYG PFWKNWQAQP KPTPVATPTE LVDLSPEQLT AIAPLLLSEL PTLKQLGFDW DGGFPVEPGE TAAIARLQEF CDRAIADYDP QRNFPAEAGT SGLSPALKFG AIGIRQAWQA ASAAHALSRS DEARNSIRVW QQELAWREFY QHALYHFPSL ADGPYRSLWQ QFPWENREAL FTAWTQAQTG YPIVDAAMRQ LTETGWMHNR CRMIVASFLT KDLIIDWRRG EQFFMQHLVD GDLAANNGGW QWSASSGMDP KPLRIFNPAS QAKKFDATAT YIKRWLPELR HVHPKDLISG EITPIERRGY PAPIVNHNLR QKQFKALYNQ LKAAIAEPEA EPDS
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