Gene Synpcc7942_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0111 
Symbol 
ID3773451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp110012 
End bp111607 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content57% 
IMG OID637798517 
ProductDnaK protein-like 
Protein accessionYP_399130 
Protein GI81298922 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0754915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATCG CGCTGGATTT CGGCACCAGT AATACTGTGG TGGCGCGTTG GAATACAGAA 
ACGCAATCGC CGGAATTGCT GTCGCTGACC AATCTCAGTC AGCGGGGCTC CCAAACCCCA
CCACTGATTC CCAGTCTGCT CTACGTCGAA GAAGCGACGA TGCCCCGTTT GCTCGCAGGG
CAAGCTGTGC GCGATCAAGG GCGCGATCGC CCGCAGGATT CCCGTTTTTT TCGCAGTTTT
AAGCGCGGGA TTGGGGCAGA AGTTACGGGC TTTCTGCCGG ATTTAGATGG TGTCTGCCCT
GACTTTGAAC AGGTCGGCCA GTGGTTTTTG GACACAGTGA TTGCTGCTTT AGAACCGGGC
GATCGCGACG GCGCTGACCT CGTGCTGACG GTGCCCGTCG ATAGCTTTGA GAACTATCGG
CTGTGGCTGA GTCGCGTGGC ACAACAGTGG CCGGTCGATC GCGTCCGCTT GATTGACGAA
CCAACGGCGG CAGCGCTGGG CTACGGTGTC GAGCAGCAGT CGCCCATTCT GGTCTTTGAC
TTTGGCGGTG GCACCCTCGA TCTCGCCTTA ATTGAGTTGG GACAGACTAC CTCCAAGGTG
CGATCGCCCT TGGGTTTCAT CCTCAAATGG GGCGACCAAT CTTTTGGCGA CAACAGCGGT
CAGCGCCCGC AACTGGCGCG GGTGCTAGCA AAAGCAGGTC GAAACCTTGG CGGCAATGAT
CTCGATGACT GGCTGACCGA CTACTTTGCG AAACAACTGA ATACGGCTCC AACGCGTGTC
CTGACGCGCT TAGCGGAGCG GATCAAAATC CAGCTTTCGA CAACGCCTGA GGCGAGCGAA
GTCTACTTTG ATGACGAAAC GCTGCAAAGC CTACAACTAC AGCTTGATCG CTCGCAATTT
CAGCAGATTC TGCACGATCG CGGCTTCTTT GAACAACTGG ATGAATTGCT CGAATCAGTC
CTCCAGCAAG GTCGCCGCCA AGGCATTAAT CCTGATGCGA TTGCAGCTGT TCTGATGGTC
GGTGGCAGCG CCCAAATTCC TGCTGTGCAA GACTGGCTGG CGGGTTATTT CCCGACTGAA
AAGATTCGCT GCGATCGCCC CTTTGAGGCG GTAGCTTGCG GTGCTTTGCA ACTGGCGCAA
GGGCTAGAAG TCCGCGATTT TCTCTATCAC AGCTACGGCA TTCGCTACTG GAACCATCGC
AGTCAGCGCC ATGATTGGCA TCCACTGATT CCGCCCGGCC AAGCCTACCC GATGGCGGAA
CCGGTCGAGC TAGTGCTGGG GGCTTCGGTG GCGCAACAAC CCAGCATGGA ATTAGTCCTC
GGTGAACTGA GTCAGGATCG CGGCGCGACG GAGATTTTCT TTGATGGCGA TCGCCTGATT
ACGCGCCGGA TTGGGCCCGA TCGCACGGCA GCAAAGGCGC TGAATGATAG CGAAACCGCC
CGCACGATCG CCCGACTTGA TCCACCCGGC GATCCGGGGG TTGACCGTCT ACGGCTCCAG
TTCTGGGTTG ATCGCGATCG TTTTTTGCGG GTGACGATTG AAGATCTGCT GACCCTGGAA
ACCGTGGTTG AGAATCAAGT GGTGATCCAG CTTTAG
 
Protein sequence
MAIALDFGTS NTVVARWNTE TQSPELLSLT NLSQRGSQTP PLIPSLLYVE EATMPRLLAG 
QAVRDQGRDR PQDSRFFRSF KRGIGAEVTG FLPDLDGVCP DFEQVGQWFL DTVIAALEPG
DRDGADLVLT VPVDSFENYR LWLSRVAQQW PVDRVRLIDE PTAAALGYGV EQQSPILVFD
FGGGTLDLAL IELGQTTSKV RSPLGFILKW GDQSFGDNSG QRPQLARVLA KAGRNLGGND
LDDWLTDYFA KQLNTAPTRV LTRLAERIKI QLSTTPEASE VYFDDETLQS LQLQLDRSQF
QQILHDRGFF EQLDELLESV LQQGRRQGIN PDAIAAVLMV GGSAQIPAVQ DWLAGYFPTE
KIRCDRPFEA VACGALQLAQ GLEVRDFLYH SYGIRYWNHR SQRHDWHPLI PPGQAYPMAE
PVELVLGASV AQQPSMELVL GELSQDRGAT EIFFDGDRLI TRRIGPDRTA AKALNDSETA
RTIARLDPPG DPGVDRLRLQ FWVDRDRFLR VTIEDLLTLE TVVENQVVIQ L