Gene Synpcc7942_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0102 
Symbol 
ID3773442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp102674 
End bp103237 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content52% 
IMG OID637798508 
Producthypothetical protein 
Protein accessionYP_399121 
Protein GI81298913 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCGA TTCCTCGGAA CTTCCACCTC AGTCCGCATC AGTTTGAGCA GCTTTGTCGG 
GCCAATCCCG ATTGCCGCTT TGAGTTGGAT GCTGACGGAC AATTAATTGA AATGAGCCCT
ACCCATTGGC AGAGTGGCCG TCGCAATCAG GCGATCGCCA CACAGCTTGG TCTGTGGTTT
CGGCAAACCA AACAAGGCGC TATCTTTGAC TCTTCAACGG GTTTTCGCTT GCCGAATGGT
GCGATTCGTT CGCCGGATGC TGCTTGGGTG ACACCGGAAC AGTTAACGCG GGCGGAGACA
CGAGGCCTGG ATGAGTTCTT TCCAGGCTGT CCGGCTTTTG TAATTGAACT GGCGTCTGCG
AGCGATCGCC CAGATGATCT GCGTGGCAAA CTTGCAGAAT ATCTGGCAAA TGGCTGTCAG
CTCGGCTGGC TGATTCTACC GACATTTCGA CAAGTAGAAG TATGGCGATC GTCCCAAGAT
CCAGAATGTC TTGAGAATCC AGAAATCATT TCTGCCGATC CACTCCTCAC TGGTTTCAGT
CTGGATCTCC GCGAAATTTG GTAG
 
Protein sequence
MVAIPRNFHL SPHQFEQLCR ANPDCRFELD ADGQLIEMSP THWQSGRRNQ AIATQLGLWF 
RQTKQGAIFD SSTGFRLPNG AIRSPDAAWV TPEQLTRAET RGLDEFFPGC PAFVIELASA
SDRPDDLRGK LAEYLANGCQ LGWLILPTFR QVEVWRSSQD PECLENPEII SADPLLTGFS
LDLREIW