Gene Synpcc7942_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0098 
Symbol 
ID3773438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp98302 
End bp100086 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content58% 
IMG OID637798504 
Productpyruvate kinase 
Protein accessionYP_399117 
Protein GI81298909 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCA ACGACTTTCA GCGCCGCACT AAAATTGTCG CCACGATTGG CCCTGCAACG 
TCCAAGCCCG AGGTGCTACG GGCGTTGATC GAAGCTGGCG CATCGACATT ACGGCTCAAT
TTCTCCCACG GAACCCACGA CGATCATCAG CGCAGCATTC GCCTGATCCG TCAGATCTCC
TTCGAGCTCA ATCGTCCCGT TGGCATTCTG CAAGACTTGC AGGGACCGAA AATCCGCCTC
GGTCGTTTTG CCGATGGCCC AATTACAGTC CAAAAGGGTG ACTCCTTCAT CCTGACCAGC
CGCAGTGTAC CGGGCTCGCA AACAATCAGC TCGGTCACCT ATGAACCGCT GGCCGATGAA
GTGCCGGAAG GCGCAACGAT TCTGCTTGAT GATGGCCGCG TCGAAATGAC GGTGGTCAAG
GTCGATCGCC AAACTCGTGA GCTGCACTGC GAAGTCGTGG TGGGTGGCAT CCTCTCGAAT
AACAAAGGGG TCAACTTCCC CGGCGTCTAT CTGTCTGTCA AAGCCCTGAC GGATAAAGAC
CGCGAAGACC TGATCTTTGG TCTGGATCAA GGGGTGGACT GGGTCGCCCT CAGCTTTGTC
CGCAACCCGC AGGATGTTCT CGAAATCAAA GAACTGATCT CTCGGGCTGG GAAGTCAGTG
CCCGTGATCG CCAAGATTGA GAAGCACGAA GCGATCGAGC AGATGGAAGC CGTGCTCTCG
CTCTGTGATG GCGTGATGGT GGCGCGGGGT GACCTCGGCG TTGAGCTGCC AGCAGAAGAA
GTGCCGATTC TGCAAAAACG ACTGATTCGC ACCGCCAATC GTCTCGGCAT TCCGGTGATT
ACCGCGACCC AAATGCTGGA CAGCATGGTC AGCAATCCGC GGCCGACCCG GGCTGAGATT
TCGGACGTCG CTAACGCCAT TCTGGATGGC ACCGACGCGG TGATGCTCTC CAACGAAACA
GCCGTCGGTA AGTTTCCGAT TGAAGCCGTT TCAACCATGG CCACGATCGC CCATCGGATC
GAAGCTGAGC AGCAATACAT CACCCTCAAC CCGACGCCGA CTAGCTCGAT TCCCAATGCG
ATCAGCCAAG CGGTGGGTCA TATCGCCGAG CAATTAGATG CGGCCGCAAT TATGACCCTG
ACCCAAAGCG GCGCGACAGC CCGCAACGTC TCCAAATTCC GCCCGACCAC GCCGATTTTG
GCGGTTACGC CCAACATTGA TGTAGCGCGT CAGCTGCAAC TGGTTTGGGG CGTGCAGCCG
CTTCTGGTCG TTGATTTGCC TTCGACGAGC CAAACCTTCC GCGCTGCCCT CAACGTCGCC
CAAGAGCGCA CTTTGCTCAA AGAAGGCGAT CTGGTAGTGA TGACAGCCGG CACCCTGCCG
GGCGTTTCCG GTTCCACTGA CTTGGTCAAG GTCGAAATCG TCACGGCAGT GATTGCTCGG
GGGATTGGCG TTGGACAGGG TAGTGTCAGT GGCAAGGCTC GCGTCATCCA CAATGCAGCG
GAAGCGGCGA CCTTGGCCCA AGGTGAAATT CTGATTGCCA CCCAGACCTC AGCGGACTAC
ATCGAAGCGA TTCGCAAAGC CAGCGGCATT GTCACGGAAG AGGAAGGCTT GACCAGCCAT
GCCGCCGTGA TTGGCCTGCG CCTCGGTATT CCCGTGATTG TTGGCGTCAA GAACGCCACT
AGCGTCGTGC GTGACGGTTC AATCCTGACG CTGGATGTGA AGCGCGGGCT ACTCTACTCC
GGTGCCGTTG GGGCTGTTGC TGCCGAGCAG CCGATTTCCG TCTAA
 
Protein sequence
MQPNDFQRRT KIVATIGPAT SKPEVLRALI EAGASTLRLN FSHGTHDDHQ RSIRLIRQIS 
FELNRPVGIL QDLQGPKIRL GRFADGPITV QKGDSFILTS RSVPGSQTIS SVTYEPLADE
VPEGATILLD DGRVEMTVVK VDRQTRELHC EVVVGGILSN NKGVNFPGVY LSVKALTDKD
REDLIFGLDQ GVDWVALSFV RNPQDVLEIK ELISRAGKSV PVIAKIEKHE AIEQMEAVLS
LCDGVMVARG DLGVELPAEE VPILQKRLIR TANRLGIPVI TATQMLDSMV SNPRPTRAEI
SDVANAILDG TDAVMLSNET AVGKFPIEAV STMATIAHRI EAEQQYITLN PTPTSSIPNA
ISQAVGHIAE QLDAAAIMTL TQSGATARNV SKFRPTTPIL AVTPNIDVAR QLQLVWGVQP
LLVVDLPSTS QTFRAALNVA QERTLLKEGD LVVMTAGTLP GVSGSTDLVK VEIVTAVIAR
GIGVGQGSVS GKARVIHNAA EAATLAQGEI LIATQTSADY IEAIRKASGI VTEEEGLTSH
AAVIGLRLGI PVIVGVKNAT SVVRDGSILT LDVKRGLLYS GAVGAVAAEQ PISV