Gene Synpcc7942_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0094 
Symbol 
ID3773434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp91676 
End bp92611 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content58% 
IMG OID637798500 
ProductDNA polymerase III subunit delta' 
Protein accessionYP_399113 
Protein GI81298905 
COG category[L] Replication, recombination and repair 
COG ID[COG0470] ATPase involved in DNA replication 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.35794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCT TTGCGCCGCT CATCGGTCAA GACCTTGCCG TTCAGTTGCT GCTGGCAGCC 
TGCGATCGCG ATCGCTTGGC GCCGGCTTAC CTGTTTGCTG GTCCTGATGG CACCGGTCGT
GGACTGGCTG CCCGTTGTTG GGCACCGCTC CTCTTGGCTG ATCAGTCGGG ACGGGTCGCT
CGCGGCAATC ATCCCGATCT GCTCTGGGTT GAGCCGACTT ATTCCCAGCA GGGAACCTTG
ATTCCTGCAA GTCAAGCCCA AGCCCAGGGA ATTCAGCGGC GAACACCGCC CCAAGTGCGA
CTGGAGCAAA TTCGCCAAAT CACTCAGTTT CTGGCACGAC CTCCTCTCGC TGCCCCGCGA
TCACTGGTGG TGATTGAACA GGCTGAAACG ATGGCTGAGG CGGCAGCCAA TGGGTTGCTC
AAAACGCTAG AAGAGCCCGG TCAAGCCACG ATTATCCTGA TGGCACCGAG TCCTGAGCTG
CTACTGCCAA CCCTTGTTTC TCGTTGCCAG CGAATTCCCT TCTATCGCCT TTCTGAGCAG
GCGATGGCGC AAATTTTGCA GACCCACGGC TTTACAGAAA TTCTCGACGC GCCAGCGGTT
CTGGCCTTAG CTCAAGGCAG TCCAGGAGCA GCTATCAGCC ATTGGCAACA ACTGCAAGCA
ATCCCGCCAG AATTGCGCGA TCGCCTTCAG CAACGGCCAA ACTCTTTGCA AGTGGCTTTG
GAACTGGCGC AAGCGATCGA TGCTGGCCTC GACGTCGAAG CCCAGCTTTG GCTTTGTCGC
TACCTCCAGC AGCAGGGCTG GTCCCAGCAA CAGCTGCAGT CCCAGCAACT GCTCCAGCTC
GAACAGGCAC AGAAACAACT GCGAGCCTTT GTTCAGCCGC GACTCGTCTG GGAAGTGCTG
CTCAGTGCTT GGGTTCAGGA CGCCGAAGGA AACTGA
 
Protein sequence
MNPFAPLIGQ DLAVQLLLAA CDRDRLAPAY LFAGPDGTGR GLAARCWAPL LLADQSGRVA 
RGNHPDLLWV EPTYSQQGTL IPASQAQAQG IQRRTPPQVR LEQIRQITQF LARPPLAAPR
SLVVIEQAET MAEAAANGLL KTLEEPGQAT IILMAPSPEL LLPTLVSRCQ RIPFYRLSEQ
AMAQILQTHG FTEILDAPAV LALAQGSPGA AISHWQQLQA IPPELRDRLQ QRPNSLQVAL
ELAQAIDAGL DVEAQLWLCR YLQQQGWSQQ QLQSQQLLQL EQAQKQLRAF VQPRLVWEVL
LSAWVQDAEG N