Gene Synpcc7942_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0089 
Symbol 
ID3773429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp87881 
End bp88615 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content57% 
IMG OID637798495 
Productcarboxymethylenebutenolidase 
Protein accessionYP_399108 
Protein GI81298900 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTG CGATCGCCAC TGAATGGGTT AAGGTTCCAG CCCCCGATCT CGAAATTGAT 
GCCTACGTAG CCGCGCCGAG CGAACCCGGT CGCTACCCTG CAGTAGTGGT GATTCAAGAG
ATTTTTGGCA TCAATAGCCA TATTCGATCA GTGGTCGAAC GATTGGCCAG ACAAGGGTTT
GTGGCGATCG CACCCGCTAT CTATCAGCGC ACCGCCCCTG GCATTGAACT GAATTACACC
GTCGAAGACA TGGCGATCGG CAGCCGCCAC AAGGAGCTGA CCACCGCCCC GCAGCTGCTC
AGTGATCTGG AGGCTGTCAT TGCCTATCTC CGCAGTCGTC CCGACGCCAA GGCAGATGCT
GTGGGCACGA TTGGCTTTTG CTTTGGTGGC CATGTCGTCT ATCTGGCGGC AACTTTGCCT
GCTGTACAAG CGACTGCCGC TTTCTACGGT GCGGGAATTG CGACCTTTAC GCCGGGTGGC
GGTGAACCGA CGATCAGCCG CACACCTGCG ATTGGGGGCA CGGTCTATGC CTTCTACGGC
ACGACCGATC CGTTGATCCC TATTGAAGAA ATTGACCAAG TCGAAGCAGC CCTGACTGCA
GCTAGCGATC GGCATCGGGT TTTCCGCTAT GCGGCGGGCC ATGGCTTCTT CTGCGATCAA
CGCTCTGACT ACGTTCCTGC AGCGGCTGCA GATGCTTGGG ATAAAGTGCT GGAGCTCTAC
CACAGCACAC TCTAG
 
Protein sequence
MSTAIATEWV KVPAPDLEID AYVAAPSEPG RYPAVVVIQE IFGINSHIRS VVERLARQGF 
VAIAPAIYQR TAPGIELNYT VEDMAIGSRH KELTTAPQLL SDLEAVIAYL RSRPDAKADA
VGTIGFCFGG HVVYLAATLP AVQATAAFYG AGIATFTPGG GEPTISRTPA IGGTVYAFYG
TTDPLIPIEE IDQVEAALTA ASDRHRVFRY AAGHGFFCDQ RSDYVPAAAA DAWDKVLELY
HSTL