Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0079 |
Symbol | |
ID | 3773796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 77138 |
End bp | 77584 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798485 |
Product | hypothetical protein |
Protein accession | YP_399098 |
Protein GI | 81298890 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.998813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCT GCATTTTGCA AGCCACCGTG GTGGAAGCCC CGCAACTGCG CTACACCCAA GATAATCAGA CCCCCGTTGC AGAAATGGTC GTGCAGTTTC CGGGGCTTAG CAGCAAAGAT GCCCCCGCTC GGCTGAAAGT TGTCGGTTGG GGTGCGGTGG CGCAAGAGCT GCAAGATCGC TGTCGGCTCA ATGACGAAGT CGTGCTCGAA GGGCGCTTGC GGATCAACTC CTTGCTCAAA CCCGACGGCA ATCGCGAGAA GCAGACAGAA TTGACAGTGA CTCGGGTGCA CCATCTCACT CTCGATAGCG CCACCGGCAT TCTGGCTCAA GAGGAGTCAG AGGTGAGCTA TGGCCGCAGC GCTGCTGCTT CAGCGCCCGT CAAAGCGAGT CCAGTTGTGA CCCCAACTGC AGCACCCGAC GTAGACTACG ACGATATTCC TTTCTAG
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Protein sequence | MNSCILQATV VEAPQLRYTQ DNQTPVAEMV VQFPGLSSKD APARLKVVGW GAVAQELQDR CRLNDEVVLE GRLRINSLLK PDGNREKQTE LTVTRVHHLT LDSATGILAQ EESEVSYGRS AAASAPVKAS PVVTPTAAPD VDYDDIPF
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