Gene Synpcc7942_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0079 
Symbol 
ID3773796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp77138 
End bp77584 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content58% 
IMG OID637798485 
Producthypothetical protein 
Protein accessionYP_399098 
Protein GI81298890 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.998813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCT GCATTTTGCA AGCCACCGTG GTGGAAGCCC CGCAACTGCG CTACACCCAA 
GATAATCAGA CCCCCGTTGC AGAAATGGTC GTGCAGTTTC CGGGGCTTAG CAGCAAAGAT
GCCCCCGCTC GGCTGAAAGT TGTCGGTTGG GGTGCGGTGG CGCAAGAGCT GCAAGATCGC
TGTCGGCTCA ATGACGAAGT CGTGCTCGAA GGGCGCTTGC GGATCAACTC CTTGCTCAAA
CCCGACGGCA ATCGCGAGAA GCAGACAGAA TTGACAGTGA CTCGGGTGCA CCATCTCACT
CTCGATAGCG CCACCGGCAT TCTGGCTCAA GAGGAGTCAG AGGTGAGCTA TGGCCGCAGC
GCTGCTGCTT CAGCGCCCGT CAAAGCGAGT CCAGTTGTGA CCCCAACTGC AGCACCCGAC
GTAGACTACG ACGATATTCC TTTCTAG
 
Protein sequence
MNSCILQATV VEAPQLRYTQ DNQTPVAEMV VQFPGLSSKD APARLKVVGW GAVAQELQDR 
CRLNDEVVLE GRLRINSLLK PDGNREKQTE LTVTRVHHLT LDSATGILAQ EESEVSYGRS
AAASAPVKAS PVVTPTAAPD VDYDDIPF