Gene Synpcc7942_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0078 
Symbol 
ID3773795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp76614 
End bp77063 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content57% 
IMG OID637798484 
Producthypothetical protein 
Protein accessionYP_399097 
Protein GI81298889 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGT ATCAGCAAAT TCTGCAGCTT CAGAGCCAAG GCCAAGGCTT CCTCAATATC 
ACTGGGGCGA TCGCTCGCAT CGTGCGCGAG TCTCGGATTC AGACGGGCCT CTGTCATCTC
TTTACTCGGC ACACTTCAGC CAGCCTGATC ATTCAAGAAA ACGCTGACCC CGATGTACTG
CACGATCTGG CCGGCTACTT CGAAGCGCTA GTTCCTGAAG CGGGCTACGA ATCGTTGGGC
GGAAGTCGTC GCTTCCGCGC CTATGCCCAC AGCGCCGAAG GCCCTGATGA TATGCCGGCC
CACATTCGCA CTGTACTAAC TCGCACCTCT GAGCAAATTC CGATCGTCGA AGGTCGCTTG
GGATTGGGCA CTTGGCAAGC TGTCTATCTC TGGGAGCATC GCGATCGCCC CCACAGCCGC
CAAGTGATTG TCCATATCAG CGGCGACTAG
 
Protein sequence
MAQYQQILQL QSQGQGFLNI TGAIARIVRE SRIQTGLCHL FTRHTSASLI IQENADPDVL 
HDLAGYFEAL VPEAGYESLG GSRRFRAYAH SAEGPDDMPA HIRTVLTRTS EQIPIVEGRL
GLGTWQAVYL WEHRDRPHSR QVIVHISGD