Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0078 |
Symbol | |
ID | 3773795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 76614 |
End bp | 77063 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637798484 |
Product | hypothetical protein |
Protein accession | YP_399097 |
Protein GI | 81298889 |
COG category | [S] Function unknown |
COG ID | [COG0432] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACAGT ATCAGCAAAT TCTGCAGCTT CAGAGCCAAG GCCAAGGCTT CCTCAATATC ACTGGGGCGA TCGCTCGCAT CGTGCGCGAG TCTCGGATTC AGACGGGCCT CTGTCATCTC TTTACTCGGC ACACTTCAGC CAGCCTGATC ATTCAAGAAA ACGCTGACCC CGATGTACTG CACGATCTGG CCGGCTACTT CGAAGCGCTA GTTCCTGAAG CGGGCTACGA ATCGTTGGGC GGAAGTCGTC GCTTCCGCGC CTATGCCCAC AGCGCCGAAG GCCCTGATGA TATGCCGGCC CACATTCGCA CTGTACTAAC TCGCACCTCT GAGCAAATTC CGATCGTCGA AGGTCGCTTG GGATTGGGCA CTTGGCAAGC TGTCTATCTC TGGGAGCATC GCGATCGCCC CCACAGCCGC CAAGTGATTG TCCATATCAG CGGCGACTAG
|
Protein sequence | MAQYQQILQL QSQGQGFLNI TGAIARIVRE SRIQTGLCHL FTRHTSASLI IQENADPDVL HDLAGYFEAL VPEAGYESLG GSRRFRAYAH SAEGPDDMPA HIRTVLTRTS EQIPIVEGRL GLGTWQAVYL WEHRDRPHSR QVIVHISGD
|
| |