| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0073 |
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| Symbol | |
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| ID | 3773790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 72000 |
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| End bp | 73196 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637798479 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_399092 |
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| Protein GI | 81298884 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAA AAGCTTTTAA GCGGGCCTTG CACCAGTCCG ATCGCTATAA CCGCAAAGGC
TTTGGCAAAA CCACCGATGT CTCGGGCGCT CTTGAGTCGG CCTATCAAAG CGACTTGATT
CAAAGCTTGC GCCAGAATGG CTACCGTCTG CAGCGTGGCG AAATCACCAT TCGCCTCGCC
GAAGCTTTTG GCTTTTGCTG GGGCGTAGAG CGAGCCGTCG CGATCGCCTA CGAAACGCGT
CAGCACTTTC CCCAAGAGCG GATCTGGATT ACCAACGAGA TCATCCACAA TCCCTCGGTC
AACCAGCATC TACGCGAGAT GAGCGTCGAG TTTATTCCCT GTGAGCGGGG CGAGAAGGAT
TTTTCCGTCG TCGATCGCGG TGATGTCGTG ATTCTGCCGG CCTTTGGGGC CAGCGTGCAG
GAAATGCAGC TGCTCGATGA GAAAGGCTGC CATATCGTCG ACACCACCTG CCCTTGGGTT
TCCAAGGTCT GGAACACCGT CGAAAAACAT AAGCGCGGTG CTCACACTTC AATCATTCAC
GGCAAGTACA ACCACGAAGA GACGGTCGCC ACCAGCTCCT TTGCCGAAAC TTATCTGGTT
GTGCTGAATC TGGAGCAAGC GCAGTACGTC TGCGACTACA TCCTTAACGG TGGCGATCGC
GACGAGTTTA TGACGCGCTT TGGCAAGGCT TGCTCGGCCG GTTTTGACCC CGATCGCGAT
CTGGAGCGGA TCGGCATTGC CAACCAGACA ACGATGTTGA AGAGCGAAAC CGAAGCAATC
GGCAAACTAT TTGAACGGAC GCTGCTGAAG AAGTACGGCC CCCAAGCGCT CAACGATCAC
TTTTTGGCCT TCAACACCAT CTGCGATGCC ACCCAAGAGC GCCAAGACGC GATGTTCCAA
CTGGTTGAGG AACCGCTGGA TTTGATCGTG GTGATCGGTG GCTTTAACTC CTCCAACACC
ACTCACTTGC AAGAAATTGC GATCGAGCGC CAGATTCCCT CCTTCCATAT CGACGCGGCA
GAACGGATTG GCCCCGGCAA CCGGATCGAG CACAAACCGC TCCACACGGA CCTGACCACG
ACAGAGCCCT GGCTACCGGC GGGCCCGCTG ACCATTGGCA TCACCTCCGG GGCTTCAACC
CCCGACAAAG TGGTGGAGGA CGTGATTGAG CGACTCTTTG ATCTGCAGCG GTCCTAG
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| Protein sequence | MDTKAFKRAL HQSDRYNRKG FGKTTDVSGA LESAYQSDLI QSLRQNGYRL QRGEITIRLA
EAFGFCWGVE RAVAIAYETR QHFPQERIWI TNEIIHNPSV NQHLREMSVE FIPCERGEKD
FSVVDRGDVV ILPAFGASVQ EMQLLDEKGC HIVDTTCPWV SKVWNTVEKH KRGAHTSIIH
GKYNHEETVA TSSFAETYLV VLNLEQAQYV CDYILNGGDR DEFMTRFGKA CSAGFDPDRD
LERIGIANQT TMLKSETEAI GKLFERTLLK KYGPQALNDH FLAFNTICDA TQERQDAMFQ
LVEEPLDLIV VIGGFNSSNT THLQEIAIER QIPSFHIDAA ERIGPGNRIE HKPLHTDLTT
TEPWLPAGPL TIGITSGAST PDKVVEDVIE RLFDLQRS
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