Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0071 |
Symbol | |
ID | 3773788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 69940 |
End bp | 71139 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637798477 |
Product | pleiotropic regulatory protein-like |
Protein accession | YP_399090 |
Protein GI | 81298882 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.237821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCTCTT CTTCAGAGTG TCCGGTGACG TCTATCCCCG CCTTTAATCT GACTGAGCAG TACCGCCGTA TCGGTGCTGA GCTAGAAACT GCGACAGCCA AGGTCTTAGC CTCGGGGGGC TACATCGGCG GACAGACTGT TGCGGACTTT GAAGCGGCTT TTGCAGCGGC CATGGGTGTG ACGGAAGCCG TGGGCTGCAA TTCGGGCACC GATGCGCTGC ATCTAGCACT GCGGGCATTA GACATCGGGC CTGGGGACGA AGTCATCACT TCGCCGTTTA CCTTTTTTGC CTCTGCAGAA GCGATTAGTT TGGCGGGGGC CACACCCGTC CTAGTCGACA TCGAACCCCA GTTCTTCAAC CTCGACTATC GCCAGATCGA AGCAGCGATT ACCCCGCGCA CCAAGGCGAT TATTCCCGTT CATCTGTTCG GCCATCCGGC GGCGATGTCG GAGATTATGG CGATTGCCCG AGCCCACAAT CTGCGCGTGA TTGAGGATTG TGCCCAAGCG ACGGGAGCAA CTTGGCAGGG TCAGCCGGTT GGCAGCTTTG GCGACTGTGG CTGCTTTAGC TTCTATCCGA CCAAAAATTT GGGGGCCTGC GGCGATGGCG GCCTCGTCAC AACCAAGAAT CCTGAAGTGG CCGATCGCCT GCGATCGCTG CGTCAGCATG GCATGCGGGT GCGCTACTAC CACGATGAGA TCGGCCTGAA TAGCCGTTTG GATGCGCTGC AGGCGGTGAT TCTCTCGATT AAGCTGCGCT ACTTGGATGA GTGGAATCAG CAGCGCCAAG CGATCGCGCA GCGCTATGGC GAAGCGATCG CCGCGATTCC CGGTCTGGTC GCCCCCAGCG TGCACGCCGA TGCCGTCCAT GTCTGGCACC AATACACGGT GCGGGTGCAG GCCTGTGGCG ATCGCAGCCG CTGTGTCAGT CATCCCTGCG ATCGCCAAGG ACTTTGCCGC GACTGGCTGC AACAACAACT GCAAGCCCAA GGCATTGGCT CGATGATCTA CTACCCCGTG CCTGTGCATC TGCAGCAGGC CTACAGCCAG TTAGGCTACA AGACTGGCGA CTTCCCTGAA GCCGAGCGTG CCGCCCAAGA AGTCCTGTCG CTGCCGATGT TCCCGGAACT CAACGAGGAT GATCAGGCTC GGGTGATCAC GGCTCTGAAG GATCTGGCGA TCGCAGCCGT CCAGTCCTAG
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Protein sequence | MCSSSECPVT SIPAFNLTEQ YRRIGAELET ATAKVLASGG YIGGQTVADF EAAFAAAMGV TEAVGCNSGT DALHLALRAL DIGPGDEVIT SPFTFFASAE AISLAGATPV LVDIEPQFFN LDYRQIEAAI TPRTKAIIPV HLFGHPAAMS EIMAIARAHN LRVIEDCAQA TGATWQGQPV GSFGDCGCFS FYPTKNLGAC GDGGLVTTKN PEVADRLRSL RQHGMRVRYY HDEIGLNSRL DALQAVILSI KLRYLDEWNQ QRQAIAQRYG EAIAAIPGLV APSVHADAVH VWHQYTVRVQ ACGDRSRCVS HPCDRQGLCR DWLQQQLQAQ GIGSMIYYPV PVHLQQAYSQ LGYKTGDFPE AERAAQEVLS LPMFPELNED DQARVITALK DLAIAAVQS
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